Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00546 ATGGCCGGTTTTTTCCCACTAGGCGGCGGCGGCGGCGGTAGCAGCGGCGGTGAGATTATTCATCCAACCGACGGATTACTTTGGTACAAGAATTATGAGAGCTTCGAAACAGAACAACAGCAACAAGGTGGAGAAGGGTTTGTTTACTCCGGCGAAAATTCGCCGGCGAGATCGTCGTTGGTGATGGTGAGATCCGGCGGAGAAGGCGGAGGGAAGGTTATTAGCTGCCAAGATTGTGGGAATCAAGCGAAAAAAGATTGCGTTCATATGCGATGTAGAACTTGTTGTAAAAGCCGTGGGTTTTTGTGTGAAACCCATGTTAAAAGTACTTGGGTACCCGCTTCCAAACGCCGTGAGCGGCTGATCCGTACTACCGGCGGTGACTCCAAACGCCCTAGAGACACCCACGCCGCTTCTTCCGGGTTTGAAATAGGGAATTTCCCGCCGGAAGTAAACTCCACGGCGGTGTTCCGATGCGTACGGATGACAACATTAGACGAACCCACCGGCACCGATCAATATGCTTATCAAACCGCCGTCAACATCGGTGGCCATATCTTCAAGGGCATTCTCTACGACCACGGCCCTGATCAACAACAACCACCCATCTCCGCCTCCCCGGATGGCGGAGCCCTCCTCATCACCACCGCCGAGTCCGCCGCACTGCTGGATCCTCCGCCGTCATACCCAGCTCCACTGACCAGCTACATCCCAGCCGGTACGCAATTTTTTCAACCCCCGACATCTTAG 750 54.27 MAGFFPLGGGGGGSSGGEIIHPTDGLLWYKNYESFETEQQQQGGEGFVYSGENSPARSSLVMVRSGGEGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERLIRTTGGDSKRPRDTHAASSGFEIGNFPPEVNSTAVFRCVRMTTLDEPTGTDQYAYQTAVNIGGHIFKGILYDHGPDQQQPPISASPDGGALLITTAESAALLDPPPSYPAPLTSYIPAGTQFFQPPTS 249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3454778 3456147 - Cp4.1LG14g01720.1 Cpe14g00546 480930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00546 249 MobiDBLite consensus disorder prediction 125 144 - -
Cpe14g00546 249 Pfam Domain of unknown function (DUF702) 74 197 - -
Cpe14g00546 249 PANTHER PROTEIN SHORT INTERNODES 1 246 - -
Cpe14g00546 249 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 147 196 IPR006511 -
Cpe14g00546 249 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 246 IPR007818 GO:0003700|GO:0006355
Cpe14g00546 249 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 75 117 IPR006510 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe14g00546 Cpe19g00837 CCT
Cpe14g00546 Cpe19g00837 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00098 Cpe-Chr2:491049 Cpe14g00546 Cpe-Chr14:3454778 2.52E-57 dispersed
Cpe14g00546 Cpe-Chr14:3454778 Cpe19g00837 Cpe-Chr19:6224497 5.21E-64 dispersed
Cpe01g00678 Cpe-Chr1:3961148 Cpe14g00546 Cpe-Chr14:3454778 1.46E-124 wgd
Cpe10g00646 Cpe-Chr10:3722467 Cpe14g00546 Cpe-Chr14:3454778 3.18E-31 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50518 PF05142 DUF702 1.10E-50 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00546 - - bhj:120073083 378.637