Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00570 ATGCACAAGCGAAACCTCACAACCACCGTCAGCCCCGTCGGCAGCCCAACCTCCGACAACATATCCGACAGCACCACTAAAGAACAGGACAGGTTTCTTCCGATCGCAAACGTGAGCCGAATCATGAAAAAATCCCTTCCTGCCAACGCCAAAATCTCAAAAGAAGCTAAAGAGACCGTCCAGGAATGCGTGTCGGAGTTCATCAGCTTCATCACCGGCGAGGCCTCCGATAAGTGTCAAAGGGAAAAACGGAAGACGATCAACGGCGACGATTTGCTGTGGGCTATGACCACTTTGGGATTCGAAAATTACGTCGGCCCTTTGAAGATTTATCTCAACAAATACAGAGAAACAGAGGAGGAGAAACATTCTTTAGCCAGACAGGACGATCCCTCCCCGTCACCGACGAAATCCGCCGCCGCCGCCACCGCCGCCGTGGAACAGATAATCGGTGGGAAATCGGCGAATTCGGTGATGGATTTTCAGAATTTAAATTCTGGGTTTTATTCACTGGGGAATCATAAGAGTTTGAATATAATCGATGGCGTTGGATTTGGGGAAAGTTTGAGGGGTAAATATGAGTGGAGTCCCTGA 594 49.33 MHKRNLTTTVSPVGSPTSDNISDSTTKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKYRETEEEKHSLARQDDPSPSPTKSAAAATAAVEQIIGGKSANSVMDFQNLNSGFYSLGNHKSLNIIDGVGFGESLRGKYEWSP 197
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3617342 3617935 - Cp4.1LG14g01430.1 Cpe14g00570 480954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00570 197 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-11 14 176 - -
Cpe14g00570 197 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 32 96 IPR003958 -
Cpe14g00570 197 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 14 176 IPR027113 GO:0001228|GO:0006355|GO:0016602
Cpe14g00570 197 Coils Coil 108 128 - -
Cpe14g00570 197 Gene3D Histone, subunit A 19 150 IPR009072 GO:0046982
Cpe14g00570 197 ProSitePatterns NF-YB/HAP3 subunit signature. 63 79 IPR003956 GO:0005634|GO:0006355|GO:0043565
Cpe14g00570 197 MobiDBLite consensus disorder prediction 1 28 - -
Cpe14g00570 197 PRINTS CCAAT-binding transcription factor subunit A signature 60 78 - -
Cpe14g00570 197 PRINTS CCAAT-binding transcription factor subunit A signature 98 116 - -
Cpe14g00570 197 PRINTS CCAAT-binding transcription factor subunit A signature 79 97 - -
Cpe14g00570 197 SUPERFAMILY Histone-fold 29 132 IPR009072 GO:0046982
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe14g00570 Cpe-Chr14:3617342 Cpe16g00379 Cpe-Chr16:5421766 3.07E-63 dispersed
Cpe01g00718 Cpe-Chr1:4179469 Cpe14g00570 Cpe-Chr14:3617342 1.23E-112 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50525 PF00808 CBFD_NFYB_HMF 5.20E-27 CL0012 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00570 K08065 - csv:116406241 305.064