Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00573 AATCATTTAAGAGAGAGAGAAGACAAAAAAAAAAGAGACCAAAAGGAGAGGAGAGAGAAGGATAGAGAATTAGAGAAAGAAGAGAGAAAAGGAAGGAAGAAAGAGAGGAAGTTGCAAGTGATCGAAGAAGATTTTGATTTTGATTTTGATTTTGATTTTGATTTGAAGGGTTTGTATTTGGGGATGTCTATGTTTGAGCTCACTAATTACCCTAAACATGCTCCTTTTTCAATCCAACCTTCTTCGTCCTCCTCTCTTCCAGGAAGGATGGGATTGTACGAGCCTATTCACCCAATTGGAATGTGGGGAGAAACTTTCCGAACCAATTTAGACGCACCATCTCTTCTAATGGAGGCCGATACAAAGTTGGAAAATCAGTCGGACGATGCCTCACTCGGCTCACTTGGAGATCCTCACATTTATAACCAAAAAGATACCAAACGGAATGAAAAGATTCAAAGACGGCTCGCACAAAATCGGGAAGCAGCTCGCAAAAGTCGCCTGCGAAAAAAGGCCTATATTAAGCAATTGGAATCGAGCCGCTTAAAACTCATCCAATTGGAGCAAGAGCTTGAAAAAGCAAGACAACAAGGTTTGTTGGCTGGATCCCGATTTGATAATAACCCGTCGGGTTTATCAGGAACCACAAATTCAGGCATCTCTGCATTTGAATCAGAGTATGAGCAATGGGTAGAAGAGCAGAACAGGCAGATATGTGATCTGAGGACTGCAGTGCATGCTGATATTACTGATATCGAGCTTCGAATACTCGTAGAAAATGCAATGAGACATTACTTCAAATTCTTTCGCATGAAAGCTAAAGCTGCAAAAGCAGACGTCTCCTATATCATGTCAGGCATGTGGAAAACATCAGCTGAAAGACTTTTCTTATGGATAGGAGGATTTCGCCCTTCAGAACTTCTCAAGGTTTTGATACCTCAGCTGAAGATACTGACCGATCAACAAGTTTCCGAAACTAGTAGCCTTACGAAATCGTGTTTACAAGCAGAAGATGCTCTTAGACAAGGTATGGAAAAACTACAACAAAATCTATTTGAGAGCGTAGTGGCTGGTCAGCTGAGTGAAGGAAGTTATCCCCTACAGATGACTGCTGCAATGGAAAGATTAGAAGCACTCATTAGCTTTGTGAATCAGGCTGACCATCTACGACAGGAAACATTGCAACAGATGTACAAAATTCTAACAACTCGGCAATCTGCTCAAGGCCTTCTTATTCTTGGGGAGTTTTTTCAACGACTCCGAGCATTGAGCTCGCTTTGGGCTAATCGTCCTTGCGAGCCTACATAG 1308 41.9 NHLREREDKKKRDQKERREKDRELEKEERKGRKKERKLQVIEEDFDFDFDFDFDLKGLYLGMSMFELTNYPKHAPFSIQPSSSSSLPGRMGLYEPIHPIGMWGETFRTNLDAPSLLMEADTKLENQSDDASLGSLGDPHIYNQKDTKRNEKIQRRLAQNREAARKSRLRKKAYIKQLESSRLKLIQLEQELEKARQQGLLAGSRFDNNPSGLSGTTNSGISAFESEYEQWVEEQNRQICDLRTAVHADITDIELRILVENAMRHYFKFFRMKAKAAKADVSYIMSGMWKTSAERLFLWIGGFRPSELLKVLIPQLKILTDQQVSETSSLTKSCLQAEDALRQGMEKLQQNLFESVVAGQLSEGSYPLQMTAAMERLEALISFVNQADHLRQETLQQMYKILTTRQSAQGLLILGEFFQRLRALSSLWANRPCEPT 435
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3635226 3641510 - Cp4.1LG14g01460.1 Cpe14g00573 480957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00573 435 SUPERFAMILY Leucine zipper domain 151 193 IPR046347 GO:0003700|GO:0006355
Cpe14g00573 435 Coils Coil 3 44 - -
Cpe14g00573 435 PANTHER TRANSCRIPTION FACTOR TGA9 86 434 - -
Cpe14g00573 435 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 149 193 IPR004827 GO:0003700|GO:0006355
Cpe14g00573 435 Coils Coil 170 197 - -
Cpe14g00573 435 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 154 169 IPR004827 GO:0003700|GO:0006355
Cpe14g00573 435 ProSiteProfiles DOG1 domain profile. 220 430 IPR025422 GO:0006351|GO:0043565
Cpe14g00573 435 Pfam Seed dormancy control 237 312 IPR025422 GO:0006351|GO:0043565
Cpe14g00573 435 PANTHER TRANSCRIPTION FACTOR TGA1 86 434 - -
Cpe14g00573 435 Pfam bZIP transcription factor 149 184 IPR004827 GO:0003700|GO:0006355
Cpe14g00573 435 SMART brlzneu 147 229 IPR004827 GO:0003700|GO:0006355
Cpe14g00573 435 MobiDBLite consensus disorder prediction 126 150 - -
Cpe14g00573 435 MobiDBLite consensus disorder prediction 1 34 - -
Cpe14g00573 435 Gene3D - 149 200 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02608 Cpe-Chr1:21130185 Cpe14g00573 Cpe-Chr14:3635226 3.69E-93 dispersed
Cpe13g01152 Cpe-Chr13:9134720 Cpe14g00573 Cpe-Chr14:3635226 1.06E-109 dispersed
Cpe14g00573 Cpe-Chr14:3635226 Cpe01g01797 Cpe-Chr1:14649876 7.12E-95 dispersed
Cpe01g00721 Cpe-Chr1:4193178 Cpe14g00573 Cpe-Chr14:3635226 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50527 PF14144 DOG1 2.50E-28 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00573 K14431 - csv:101208419 614.379