Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00581 ATGTCCGTTGCCAACGCCGACATATCTCCAACTATGTTGGAGTCCTCGACGGTCAGGGATATTCCCGCCCTTGACATCGACAAGTGCAGCCCAGCGGACAGGGCGCAGTGGGTAACAAACCCACCAGAACCGCCGGGAATTTGGCGAGACCTCCTCAACTCTCTCCGCGACACCATGTTTCCTAATCCGACCAAGCTTTTCTCCCCCAAAAGAAACACCCGAATTGCTCTGCTCGGTTCCCTTTTGCAGGCCGTCTTCCCCATCCTCTCATGGGGCCGGAGCTACAATCTCGCCATGTTCAAACACGACATCTTTGCCGGCCTGACCCTTGCCAGCCTCTGCATTCCCCAGAGCATTGGATATGCAAATCTGGCGAAGCTTGATCCACAATATGGCCTCTATACAAGCATTGTGCCGCCACTGGTTTATGCAGTATTAGGAACTTCAAGGGAAATAGCCATCGGCCCAGTGGCCATAGTATCTCTGCTTTTACCGTCGCTGATCGGGAAAATTCAAGATCCCGCCGCCGACCCACTTGCCTACAGAAACCTCATCTTCACCACCACTTTCTTCGCCGGAATCTTCCAAGCCGCCTTTGGGTTCTTACGGCTGGGATTTTTGGTGGATTTTCTATCACATGCCGCCATTGTTGGATTCATGGGGGGAGCTGCCATTGTTATTGGGCTTCAACAGCTCAAAGGATTGCTTGGCCTCACTCACTTCACTAACAAAACTGATATCATCTCTGTTATGGAAGCTGTGTTTGGATCATTCCGCCATGAAAATACTCGGTGGAACCCATTGAACTTCATCATTGGCTGCTCCTTCCTGTCGTTCATCCTCATCACCAGATTATTGCACGGCGTCAAGATCGTAAAACGAGTCCCCGCCGGCCTCAACCCCATCTCCGCTCGCCACCTCCAATTCCACAGCCCTCAAATCTCCCAAATCACCACCGCCTCCCTCATCGTCGCCGTTATAGCTCTCACAGAAGCTATTGCTGTCGGGAGATCCTTCGCCTCCATGAAAGGATACACCATTGATGGCAACAGAGAGATGGTTGCCTTAGGCTGCATGAACCTCGCCGGCTCTCTCACTTCTTGCTACACAGCCACCGGCTCCTTCTCCCGGACGGCCGTGAATTTCACTGCCGGTTGCCAGACGGCGGTTTCCAACATAGTAATGGCTGTGACGGTGATGATATCATTAGAGGTGTTAACTAAGCTGCTCTACTTCACTCCCAACGCCATTCTAGCCTCCATAATTCTGTCGGCACTTCCAGGCCTCATTGATTTTCATCAAGCTTACAATATCTGGAAAATCGACAAGCTCGACTTCTTCGCCTGCCTCGGAGCCTTCCTCGGAGTCCTCTTTCTATCCATAATTCTAATCTCAATCAAACCTGGGACTGAGATTTTGGGCAAACTCCCTGGAACTGATACCTTTGGTGATATCCATCAATACCCAATGGCCCTCAACACTCCTGGAGTCCTCATCCTCCGTGTTAAATCTTCCTTACTTTGCTTCGCAAATGCCAACTTCATCAAAGACAGGATTCTGAGGATGATCAGCAATCAAGAAGATGCATCAGGGAAGAGAGGCATTCAATTCCTAGTGATTGATCTCTCAAATTTAATGAACATTGATACTTCTGGAATTGGTTCTCTTGAAGAGCTACAAAATGGTTTGGGAGGCAGTGGAGTAGAGTTGACCATTGCAAACCCAAAATGGGAAGTGATTCATAAGCTAAGGGTAGCAAATTTTGTTGGGAAGCTGAAAGGGAAGGTGTTCTTGAGTGTTGGGGAAGCTGTGGATGCATGTGTTGCAGCTAAATTGGGAGCCATGATCTAA 1851 49.59 MSVANADISPTMLESSTVRDIPALDIDKCSPADRAQWVTNPPEPPGIWRDLLNSLRDTMFPNPTKLFSPKRNTRIALLGSLLQAVFPILSWGRSYNLAMFKHDIFAGLTLASLCIPQSIGYANLAKLDPQYGLYTSIVPPLVYAVLGTSREIAIGPVAIVSLLLPSLIGKIQDPAADPLAYRNLIFTTTFFAGIFQAAFGFLRLGFLVDFLSHAAIVGFMGGAAIVIGLQQLKGLLGLTHFTNKTDIISVMEAVFGSFRHENTRWNPLNFIIGCSFLSFILITRLLHGVKIVKRVPAGLNPISARHLQFHSPQISQITTASLIVAVIALTEAIAVGRSFASMKGYTIDGNREMVALGCMNLAGSLTSCYTATGSFSRTAVNFTAGCQTAVSNIVMAVTVMISLEVLTKLLYFTPNAILASIILSALPGLIDFHQAYNIWKIDKLDFFACLGAFLGVLFLSIILISIKPGTEILGKLPGTDTFGDIHQYPMALNTPGVLILRVKSSLLCFANANFIKDRILRMISNQEDASGKRGIQFLVIDLSNLMNIDTSGIGSLEELQNGLGGSGVELTIANPKWEVIHKLRVANFVGKLKGKVFLSVGEAVDACVAAKLGAMI 616
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3688915 3693800 - Cp4.1LG14g01340.1 Cpe14g00581 480965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00581 616 CDD STAS_SulP_like_sulfate_transporter 488 592 - -
Cpe14g00581 616 ProSiteProfiles STAS domain profile. 507 607 IPR002645 -
Cpe14g00581 616 SUPERFAMILY SpoIIaa-like 494 607 IPR036513 -
Cpe14g00581 616 Gene3D STAS domain 467 610 IPR036513 -
Cpe14g00581 616 PANTHER SULFATE TRANSPORTER 2.2 32 285 IPR030315 GO:0008272|GO:0015116
Cpe14g00581 616 PANTHER SULFATE TRANSPORTER 32 285 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cpe14g00581 616 PANTHER SULFATE TRANSPORTER 287 612 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cpe14g00581 616 ProSitePatterns SLC26A transporters signature. 129 150 IPR018045 GO:0008271|GO:0008272
Cpe14g00581 616 Pfam Sulfate permease family 286 450 IPR011547 GO:0016021
Cpe14g00581 616 Pfam Sulfate permease family 100 285 IPR011547 GO:0016021
Cpe14g00581 616 PANTHER SULFATE TRANSPORTER 2.2 287 612 IPR030315 GO:0008272|GO:0015116
Cpe14g00581 616 Pfam STAS domain 488 603 IPR002645 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe14g00581 Cpe-Chr14:3688915 Cpe15g00240 Cpe-Chr15:2196356 0 dispersed
Cpe14g00581 Cpe-Chr14:3688915 Cpe01g02010 Cpe-Chr1:17123361 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00581 K17469 - csv:101213063 909.057