Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00602 ATGAAAATGATGCTAGTTAGGATGGGAGTACTCTATCTTACAATTCTAATACTGGCTTGCTTTCATTATCTTGCGGTGTCTGATTTTCAAGGCGATGCACTCTTTGCACTGAGGAATGCATTGAATGCAACTGCAAATCAGCTAACAGATTGGAACCCAAATCAAGTCAATCCATGTACTTGGTCGAATGTTATATGTAGTGGAAACAATGTGATCTCTGTATCCTTGTCTTCAATGGGATTTACTGGAACCTTGTCTCCGAGAATTGGAGTTCTAAAATCACTTTCAACCCTGGTTTTGCAGGGAAATTACATAACTGGAGAGATACCAAAGGATTTTGGAAACCTGACAAATTTGGTTAGTTTGGATTTGGGAAATAACAGCCTAACTGGCCAAATACCGTCGTCCCTGGGTAATCTTAAGAAACTACAGTTCCTAACTCTGAGTCATAATCGTCTAACGGGGACTGTTCCAGAGTCACTTTCAAGCATTGATAGCTTGATCAATCTTCTGCTGGATTCGAATGAACTCAGTGGCTCAATTCCGCAGCAGTTATTTCAAGTTCCAAAATTCAACTTTTCTGGAAACAAGTTAAATTGTGGCGGGAAATCCCTTCATGCCTGTGCTTCAGATGGTACAAACTCAGGTTCTTCCAATAAACCCAAGGTTGGCCTTATAGTTGGAATAATTGCTGGGTTCACCGTTGCTCTTCTTTTGGTCGGTGTATTGTTTTTCTTGTCTAAGGGTAGATATAAAAGCTACAAGCGTGAAGTGTATGTAGATGTTCCAGGTGAAGATGATCGAAGAATTGCATTTGGTCAGCTGAAAAGATTTGCATGGAGGGAACTACAACTAGCTACAGAAAACTTCAGTGAAAAAAATGTTTTAGGACAAGGAGGCTTTGGAAAGGTGTATAAAGGGGTGCTTGCCGATGGCACCAAAGTTGCAGTGAAACGGTTGACTGATTATGAAAGTCCAGCGGGTGATGCTGCTTTTCAGCGTGAAGTTGAGATGATTAGTGTAGCTGTTCATAAAAATCTGTTGCGTCTCATTGGGTTTTGTACAACTCAGACAGAACGCCTATTGGTATATCCCTTTATGCAGAACTTGAGTGTTGCCTACCGACTTCGAGAACTTAAGCCTGGGGAGCCTGTTTTAGATTGGCCTACTCGTAAACGGGTGGCATTGGGCACAGCTCGTGGTTTAGAGTATCTTCATGAACATTGCAATCCAAAGATCATTCATCGAGATGTTAAGGCAGCTAATGTACTGCTTGATGAAGATTTTGAAGCAGTTGTGGGCGATTTTGGCTTAGCAAAGTTGGTTGATGTTAGGAAGACTAATGTCACTACTCAAGTTCGAGGGACAATGGGTCACATAGCACCGGAGTACTTATCCACCGGAAAATCATCCGAAAGGACTGATGTTTTTGGTTATGGTATCATGCTTTTAGAACTCGTTACGGGGCAACGTGCAATCGACTTCTCCCGCTTAGAAGAAGAAGACGATGTTTTACTGCTCGACCATGTTAAGAAACTAGAAAGGGAGAAACGACTCGATGCCATTGTCGATCGAAATCTAAAGAACTACAACATTCAAGAGGTGGAGATGATGATTCAAGTTGCATTGCTGTGCACACAGCCATTATCGGATGACCGCCCTGCAATGTCGCAAGTGGTTCGGATGCTGGAAGGAGAGGGATTGGCGGAAAGGTGGGAAGAATGGCAGCATTTGGAGGTGAGTCGCAGACAAGAGTATGAGAGACTGCAGAGAAGATTTGAATGGGGTGAAGATTCTATACATAGACAGGATGCAATCCAGTTGTCTGGTGGAAGATGA 1839 42.69 MKMMLVRMGVLYLTILILACFHYLAVSDFQGDALFALRNALNATANQLTDWNPNQVNPCTWSNVICSGNNVISVSLSSMGFTGTLSPRIGVLKSLSTLVLQGNYITGEIPKDFGNLTNLVSLDLGNNSLTGQIPSSLGNLKKLQFLTLSHNRLTGTVPESLSSIDSLINLLLDSNELSGSIPQQLFQVPKFNFSGNKLNCGGKSLHACASDGTNSGSSNKPKVGLIVGIIAGFTVALLLVGVLFFLSKGRYKSYKREVYVDVPGEDDRRIAFGQLKRFAWRELQLATENFSEKNVLGQGGFGKVYKGVLADGTKVAVKRLTDYESPAGDAAFQREVEMISVAVHKNLLRLIGFCTTQTERLLVYPFMQNLSVAYRLRELKPGEPVLDWPTRKRVALGTARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLKNYNIQEVEMMIQVALLCTQPLSDDRPAMSQVVRMLEGEGLAERWEEWQHLEVSRRQEYERLQRRFEWGEDSIHRQDAIQLSGGR 612
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3825757 3831588 - Cp4.1LG14g01120.1 Cpe14g00602 480986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00602 612 ProSitePatterns Protein kinases ATP-binding region signature. 296 318 IPR017441 GO:0005524
Cpe14g00602 612 SUPERFAMILY L domain-like 30 200 - -
Cpe14g00602 612 Gene3D Transferase(Phosphotransferase) domain 1 367 583 - -
Cpe14g00602 612 Gene3D Ribonuclease Inhibitor 28 209 IPR032675 -
Cpe14g00602 612 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Cpe14g00602 612 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 7 612 - -
Cpe14g00602 612 Pfam Protein kinase domain 291 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe14g00602 612 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 612 - -
Cpe14g00602 612 SMART serkin_6 290 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe14g00602 612 SUPERFAMILY Protein kinase-like (PK-like) 271 564 IPR011009 -
Cpe14g00602 612 Gene3D Phosphorylase Kinase; domain 1 259 366 - -
Cpe14g00602 612 ProSiteProfiles Protein kinase domain profile. 290 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe14g00602 612 Pfam Leucine rich repeat 94 153 IPR001611 GO:0005515
Cpe14g00602 612 Pfam Leucine rich repeat N-terminal domain 30 67 IPR013210 -
Cpe14g00602 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 413 425 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00719 Cpe-Chr1:4184686 Cpe14g00602 Cpe-Chr14:3825757 0 dispersed
Cpe14g00602 Cpe-Chr14:3825757 Cpe19g01075 Cpe-Chr19:7333938 7.30E-08 dispersed
Cpe01g00748 Cpe-Chr1:4335235 Cpe14g00602 Cpe-Chr14:3825757 6.78E-44 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62835 PF00069 Pkinase 2.80E-42 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00602 - - csv:101220302 1123.61