Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00637 ATGGGGTTCCGATTCGGGTTTGGTTCTTGCAGTGGCGCTTCTCTCGTCGGTCTGTTCGATTTGCATTGGACCCCTCCACTGACCTCATCCCTTATTTCAAAGAATGAGGAAGCTGGCTTTGCTGGGATGAACTCCTTTAGAAGGCTTGCTCTCCTTGGAGCAGGCATTTCTGGGTTTTTCAGTTTCGCAACTATAGCATCTGCTGATGAGGCAGAACATGGCTTGGAGTGCCCAAACTATCCCTGGCCTCACCAGGGCATCTTGAGTTCATATGATCATGCTTCGTTCCAAAGGGCTAAAGAATTCCCTGGAAAACACCAGGTGAGACTGGAATTTTTCAATGTCTCCGCCAATATTTCATTGAGAAGGATTCGTCGTGGCCATCAGGTTTACCAACAAGTTTGTGCATCCTGTCATTCCATGTCTTTGATATCATACCGTGATTTGGTTGGTGTTGCATATACTGAAGAGGAGACAAAAGCAATGGCTGCTGAAATTGAGGTAGTTGATGGGCCCAATGATGAAGGTGAGATGTTCACTCGTCCAGGTAAACTCAGTGACCGGTTTCCTGAACCATATGCAAATGAACAAGCTGCTAGATTCGCTAATGGGGGAGCATACCCTCCGGATCTGAGCCTTATCACAAAAGCTCGTCATAATGGTCAGAATTATGTATTTGCCCTTCTTACTGGTTATCGTGATCCACCTGCTGGCGTTTCGATCCGAGAGGGTCTGCACTATAACCCTTATTTCCCTGGGGGAGCAATTGCGATGCCTAAGATGCTTAATGATGGAGCTGTTGAGTACGAAGATGGTACCCCGGCGACGGAAGCACAGATGGGTAAAGATGTTGTCTCGTTCTTGTCATGGGCTGCTGAACCAGAAATGGAAGAAAGGAAACTGATGGGATTCAAATGGATCTTCGTGCTATCTCTGGCTCTACTTCAGGCCGCATATTATCGCCGATTGAAGTGGTCAGTTTTGAAGTCCCGCAAGCTGGTTCTTGATGTGGTCAATTAG 1020 47.16 MGFRFGFGSCSGASLVGLFDLHWTPPLTSSLISKNEEAGFAGMNSFRRLALLGAGISGFFSFATIASADEAEHGLECPNYPWPHQGILSSYDHASFQRAKEFPGKHQVRLEFFNVSANISLRRIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPEPYANEQAARFANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATEAQMGKDVVSFLSWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLKWSVLKSRKLVLDVVN 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4095438 4102425 - Cp4.1LG14g00770.1 Cpe14g00637 481021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00637 339 Gene3D - 105 294 IPR036909 GO:0009055|GO:0020037
Cpe14g00637 339 PANTHER CYTOCHROME C1-1, HEME PROTEIN, MITOCHONDRIAL 36 101 - -
Cpe14g00637 339 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 294 338 IPR021157 -
Cpe14g00637 339 Gene3D - 295 338 - -
Cpe14g00637 339 PRINTS Cytochrome C1 signature 244 255 IPR002326 GO:0009055|GO:0020037
Cpe14g00637 339 PRINTS Cytochrome C1 signature 80 99 IPR002326 GO:0009055|GO:0020037
Cpe14g00637 339 PRINTS Cytochrome C1 signature 294 309 IPR002326 GO:0009055|GO:0020037
Cpe14g00637 339 PRINTS Cytochrome C1 signature 255 274 IPR002326 GO:0009055|GO:0020037
Cpe14g00637 339 PRINTS Cytochrome C1 signature 275 294 IPR002326 GO:0009055|GO:0020037
Cpe14g00637 339 SUPERFAMILY Cytochrome c 119 293 IPR036909 GO:0009055|GO:0020037
Cpe14g00637 339 PANTHER CYTOCHROME C1 36 101 IPR002326 GO:0009055|GO:0020037
Cpe14g00637 339 PANTHER CYTOCHROME C1 123 339 IPR002326 GO:0009055|GO:0020037
Cpe14g00637 339 Pfam Cytochrome C1 family 122 326 IPR002326 GO:0009055|GO:0020037
Cpe14g00637 339 PANTHER CYTOCHROME C1-1, HEME PROTEIN, MITOCHONDRIAL 123 339 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00740 Cpe-Chr1:4301367 Cpe14g00637 Cpe-Chr14:4095438 4.26E-07 dispersed
Cpe01g00782 Cpe-Chr1:4578705 Cpe14g00637 Cpe-Chr14:4095438 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00637 K00413 - csv:101215010 563.533