Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00646 ATGGTTCTTGTTGGTTCTTTGCAACTGTCCTATCATCTGGGACCGTGGAAAAACCATTTGCTCGAAGAAAATCTTAAGTTTACCTCTCATAGCAATAACATACGGTTACTGAATGTAGCCAGTCCATCGTCTCTTTTATTTCAGCAGAAGAACACTTGGAGCAGTCATTTATTTAGCTTGAAATACCCACCTAGTTACGTTGTGCCTTCTAGATACAATGCATTCAGGTGCCATTCGTCATTGATGACAAACCAACCACTGGATCCCCCTGGGATGAAGGCTGCTATAGTGGCGTTGACAAGGTTTTGTAATGTATTAGGTGGTTGTCCTCCTCCAGTGGTTAAGATGGTTCCTGCAGTTAGTATTATGATATTTTCTGTATGGGGTATTGGACCATTTTTGCGTTATACAAGAAGCCTACTCCATAGTGATAGTAACTGGAAGAAAAGCCAGACATATAAAGTCATGACCTTGTATCTTCAACCATTATTGCTATGGACTGGAGCAACACTTATTTGCAGAGCTTTAGATCCAGTAGTTTTACCTACAGAGTCTAGCCAAGTTGTGAAGCAACGGGTGTTGAATTTTGTTAGGTCATTGTCCACTGTACTGGCCTTTGCGTATTGCTTATCTAGCATGATTCAACAAGCACAGAAATTCTTCTCAGAGACTAGTGAATCCAGTGATGCGAGAAATATGGGCTTTCAATTTGCTTGGAAAGCTGTGTACTCTGCAGTATGGGTTGCTGCTCTCTCGTTGTTCATGGAGCTGTTAGGCTTTTCAACCCAAAAATGGCTTACAGCTGGAGGTCTTGGGACTGTGTTGCTGACATTAGCTGGCCGCGAGATTTTCACCAACTTTCTCTCAAGTGTAATGATTCATGCAACCCGTCCTTTCGTTGTAAATGAGTGGATCCAAACGAGGATCGAGGGCTATGAAGTTTCTGGAACTGTTGAGCATGTAGGCTGGTGGTCGCCAACGATCATTAGAGGTGAAGATCGTGAAGCAGTTCACATACCAAACCATAAGTTTACCATGAATGTCGTGAGAAATCTCAGTCAAAAAACTCACTGGCGGATTAAAACCCACCTAGCCATCAGCCATTTGGATGTCAGTAAAATCAATAATATTGTCGCAGACATGCGGAAAGTCTTGGCAAAGAACCCTCAAGTTGAACAACAGAGATTGCATAGAAGAGTTTTCTTGGAAAACGTGAATCCTGAAAATCAGGCCCTTTTGATTTTGATATCTTGCTTTGTCAAGACTTCACATTTTGAAGAATACCTTTGTGTGAAGGAAGCTATATTTTTGGATCTTCTTAGAGTCATTAGACATCACCGAGCTCGACTTGCGACACCAATCCGCACAGTGCAGAAGATGCATAGTGATTCAGACTTGGAAAGCATTCCATTTTCTGATTCAATATTTGGTCATGGTGGTGCGACTTTGAATCGCCGCATGCTGATGATTGAACCCCCCTACAAAATTTACGGAGATGATAGAAAGCAAAGCCATGGTAGGACATCACGCACAACAACTGGAGAACAAAACAGTAAGCCCATTGCACGGTCGTCGGGTGACAACAAGGCATCTAAAGAGACAACACCATCCGAAAGAAAGACGGAAGTAAAGACTGGAGAAGGACGAGACTCCGATACAAAAATACATTCCAAAGTTCCGATGTCGACCTCTGAAGATAAACCAAGCAGTGAATCGAAACATAAATCATCATCAAGGTCTGTGTCGAGTACGAATGGTATCGCTGATATGCCATCGTCTGATGCCAAAACAACTACATCAGATACTGATAATTCAATGCAAGATTCTGGCTCCTCCAAGAAATCCAAAAATAGCTCAGGGAGTAACAACAAGCAGAACTACAAGCCTATCCATTCTTCTGTTTCCTTTCAGGAAGATGTCAAGAAACCAGAAGGAACTACTTCATCAGCTTCACAGCCAAGGATAGAAGGCGATCAGACGACGAATCCATCAACAACAAAGCCCGGCGTAGAAGAGAATATAATCCTCGGCGTTGCTTTGGATGGCTCTAAGAGAACACTTCCTATCGACGACGACACGCCATCTTCCCCTCAAACGACGTTGGGAGCAAAAGATTTGGCTGCTGCATCCCTGAATGGGAACGGGGCGACTGGAGCAACAACTCCCGACAAGGAAACGAAACGGCAGTCTCCTCCTACCACATCTTCTATTGAATAA 2217 43.26 MVLVGSLQLSYHLGPWKNHLLEENLKFTSHSNNIRLLNVASPSSLLFQQKNTWSSHLFSLKYPPSYVVPSRYNAFRCHSSLMTNQPLDPPGMKAAIVALTRFCNVLGGCPPPVVKMVPAVSIMIFSVWGIGPFLRYTRSLLHSDSNWKKSQTYKVMTLYLQPLLLWTGATLICRALDPVVLPTESSQVVKQRVLNFVRSLSTVLAFAYCLSSMIQQAQKFFSETSESSDARNMGFQFAWKAVYSAVWVAALSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIQTRIEGYEVSGTVEHVGWWSPTIIRGEDREAVHIPNHKFTMNVVRNLSQKTHWRIKTHLAISHLDVSKINNIVADMRKVLAKNPQVEQQRLHRRVFLENVNPENQALLILISCFVKTSHFEEYLCVKEAIFLDLLRVIRHHRARLATPIRTVQKMHSDSDLESIPFSDSIFGHGGATLNRRMLMIEPPYKIYGDDRKQSHGRTSRTTTGEQNSKPIARSSGDNKASKETTPSERKTEVKTGEGRDSDTKIHSKVPMSTSEDKPSSESKHKSSSRSVSSTNGIADMPSSDAKTTTSDTDNSMQDSGSSKKSKNSSGSNNKQNYKPIHSSVSFQEDVKKPEGTTSSASQPRIEGDQTTNPSTTKPGVEENIILGVALDGSKRTLPIDDDTPSSPQTTLGAKDLAAASLNGNGATGATTPDKETKRQSPPTTSSIE 738
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4178988 4187382 + Cp4.1LG14g00730.1 Cpe14g00646 481030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00646 738 Gene3D - 194 297 - -
Cpe14g00646 738 MobiDBLite consensus disorder prediction 495 738 - -
Cpe14g00646 738 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 730 IPR045042 -
Cpe14g00646 738 Gene3D - 298 351 IPR023408 -
Cpe14g00646 738 MobiDBLite consensus disorder prediction 689 705 - -
Cpe14g00646 738 Pfam Mechanosensitive ion channel 241 447 IPR006685 GO:0016020|GO:0055085
Cpe14g00646 738 MobiDBLite consensus disorder prediction 532 574 - -
Cpe14g00646 738 SUPERFAMILY Sm-like ribonucleoproteins 283 353 IPR010920 -
Cpe14g00646 738 MobiDBLite consensus disorder prediction 713 738 - -
Cpe14g00646 738 MobiDBLite consensus disorder prediction 509 531 - -
Cpe14g00646 738 MobiDBLite consensus disorder prediction 575 669 - -
Cpe14g00646 738 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 2, CHLOROPLASTIC 1 730 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00169 Cpe-Chr7:1006208 Cpe14g00646 Cpe-Chr14:4178988 0 dispersed
Cpe07g00725 Cpe-Chr7:6161195 Cpe14g00646 Cpe-Chr14:4178988 2.03E-09 dispersed
Cpe14g00646 Cpe-Chr14:4178988 Cpe11g00479 Cpe-Chr11:2754517 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00646 K22047 - csv:101217250 1131.32