Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00703 ATGGTGCTCATCAAGTCCAATAATCATTGGGCTTTCCTGGAAGAAATTGAAGCACCCATGTGGTTTGATCTCACCTTAGAAGGGAGGTCCAACAATCAGAACATTGATGATAAATGGTTCTTTACACACCACCCGGTCCACCAAAGTTCCTCCCATGACCTGAAATTAGCATTTTCTCAGCTCTTCGAGGAAAGGACTTTAAATTTGGAAATATCTGTGTCTTCTTCTCTGAACCTTCCCAATTCTGTCTCAAGATCAAGAGGGGACTTTGAGGACAAGAAGTGCAAAGGCAGCTGTCAAGGTTTTGCAATGGACAAGCATATTGTAAGTGAGAAGCTGAGTTCAGGATCAGCCACTAAATTGAGCTATACAGACTCAAAAGGAACTTCGAGTTCAAATCTGAGTTTGGTTTCTGATGCAAGCTGTTTAACCGAAAACTCCAGGCCAAATGTTTTGGTTACTGGTTCGAGTTCAGAGGGAAAGGAGCCAGCTGACAGCAGAACTAGCAGCACTATCATAACTGGTTTGGGTCGTCAACAACAATGTAAGGCAACGGAGGTAACAAGCCAACCATTGAGCATGTCTAGTAGACTTTTGTCAGATATGAGGAGAAGTCTCAGGAAAAGCTGTGCCAATAGACAAGTATCGAGATTGGAGGTTAATAACTGTCAAAGACAGTCAAGTGGCCATAACTCTTCTTCGAGTAATTCAAGCACCACATGCTCCTCTTTGAATCCTGGTTTTGATGCTAAAAGCATCACCAATACATCAGAACAACACCTGAAAAGTAGTGTAGGTGTTGGAAACTTTTCCAGGATGACTCAAACAGCAATGAACAAATCCAAAGATTCAAGTGTTTTCTCGAGCACATTAAAGATTCAAGTGAAGGGCGCGAGTTCCAACTCAAGAAGAGTTAGTAAATCCTATGCTAAGCCCACTAAGCTCGCCCACCTTGAGTCTTCAAAACCAAAGATACTTCGTCCAAAAGCTCCTCTACTACAGCAAAGAAACCTTCAAAACACTTGTTTAAAGCCAAAGAAAAAGGAAAGTTTAGATGGAATAGGAGGATGCAAGACTGTAGTAGCTGGAAAGGAGAATGCAATAAGGAGAATTGCTGTGAGTCAGAAATGCAATGGTAGAGACCCTTCTACTTTTAATATGGTCAAGGATCAGAAAAGGACAGAGCATAAGGTTCCACAAAGACTTGGTGGACGAAGTGTAGTTAGCTCGAAGCAGCAGGCCAAAAAGCATCATCCAAGTGAAGGAAAAAGTCTGGAAATTGGAAGCAAAAGGGTATACTTCCGTTGA 1308 42.05 MVLIKSNNHWAFLEEIEAPMWFDLTLEGRSNNQNIDDKWFFTHHPVHQSSSHDLKLAFSQLFEERTLNLEISVSSSLNLPNSVSRSRGDFEDKKCKGSCQGFAMDKHIVSEKLSSGSATKLSYTDSKGTSSSNLSLVSDASCLTENSRPNVLVTGSSSEGKEPADSRTSSTIITGLGRQQQCKATEVTSQPLSMSSRLLSDMRRSLRKSCANRQVSRLEVNNCQRQSSGHNSSSSNSSTTCSSLNPGFDAKSITNTSEQHLKSSVGVGNFSRMTQTAMNKSKDSSVFSSTLKIQVKGASSNSRRVSKSYAKPTKLAHLESSKPKILRPKAPLLQQRNLQNTCLKPKKKESLDGIGGCKTVVAGKENAIRRIAVSQKCNGRDPSTFNMVKDQKRTEHKVPQRLGGRSVVSSKQQAKKHHPSEGKSLEIGSKRVYFR 435
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4616207 4619563 + Cp4.1LG14g00230.1 Cpe14g00703 481087

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00703 435 MobiDBLite consensus disorder prediction 221 243 - -
Cpe14g00703 435 MobiDBLite consensus disorder prediction 148 196 - -
Cpe14g00703 435 MobiDBLite consensus disorder prediction 391 435 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00703 - - - cmax:111483281 776.163
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00834 Cpe-Chr1:4945607 Cpe14g00703 Cpe-Chr14:4616207 1.30E-119 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g299 . . . . . . . . Cmo16g00864 . . . . . . . . . . . . . . . Cla10g00606 Cam10g0599 Cec10g0626 Cco10g0602 Clacu10g0628 . Cre10g0840 . . . Cone15ag1099 . Csa03g00594 . . . . . . . . . . . . . Cma04g00919 . Car04g00861 Car16g00820 Cpe14g00703 . . . . . . . . . . . . . . . . . Chy06g01729 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009429 0 0 1 2 1 1 2 1 1 1 1 1 2 1 1 2 0 1 2 1 1 1 1 1 1 1 1 3 1 1 34
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cpe14g00703 Cpe_Chr14 FPKM 3.450217 11.973393 11.272884 8.38764 6.047456 7.630625 4.831551 18.561968 21.474424 21.618864