Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00704 ATGGCCACCTCCTCCGACGAAGAAGTAGAAAAAGAATTACAAGAACACGACGGTGGCTTCTGCCGGAGCCTCTACGGAGTCGGCTCGGTTCTCGACCCGAGAGCCAAATGGGTCCGAGAATGGAACCGGGTCTTCCTCCTCGTCTCCGCCGCAGGCCTCTTCGTGGACCCTCTCTTCCTCTACACGCTCTCCATAAGCGAGTCATGGATGTGCTTGTTTGTTGATGGGTGGTTAGCCATCACCCTCACCGTCCTCCGCTGCACCGCCGACGCCTTCCACCTTTGGAACATGTGGCTCCAGCTCAAAACTGCCACAAGATACTCCTTCGCCGGTGGAGCTTCCACCGCAGCCACGCCGGAGAATAGAGGCCTTAGAGATTCCACCCCACGCGCCGTCGCTCTCCGCTACTTCAAATCCAAAAAAGGCTTCTTCTTTGATCTCTTCGTTATTCTTCCACTCCCACAGGTGGTATTATGGGTAGTAATTCCAAGAATAATGAAGGAAGGATCAGTGACATTGGTGATGACAGTATTGTTAATAGTATTTCTATTTCAATACTTACCGAAATTGTACCATTCGGTTTGCCTGTTGCGGCGCCTCCAAAACCTGTCGGGAGCCACGAGCAGCTGTGGGGTGAGGGTGTTGTCGTGCAAAGATCGTATCTTTTATGGAGGAAAGATGGGAATGGGGAGAGACAGTGCAAGATTTGATTGGGCGAGTAACAGGCAACCGAAATTCATGTGTTTGGATACTGCTGACAACTTTAATTATGGAGCTTATAAGTGGACTGTTCAGCTTGTTGTCAACCAAAGTCGCTTGGAGAAGATCCTTTTTCCCATCTTTTGGGGTCTCATGACTCTTAGTACCTTTGGGAACTTGGAGAGCACCACGGAATGGCTGGAAGTTGTGTTCAATATCATTGTTCTCACCAGTGGACTCTTATTGATGAGGAATCTAGAGTGGTGGATGAGAAAGCGACATCTTCCACAAGGCTTCCGACAGCGTGTTCGGAACTTCGAACGGCAACGTTGGGCAGCAATGCGCGGAGTTGACGAGTGCGAGATGATAAAAAACCTACCGGAAGGGCTCCGACGAGAGATAAAGTATCACCTTTGCTTGGATCTAGTTAGGCAGGTACCATTGTTTCAACACATGGATGATCTTGTTCTTGAGAACATTTGTGACCGTGTCAACCAAGTCTTACGCGACGGCGTGAAAAGCTGCTGCATGTTGGGGCCAGGCAACTTCAGCGGCGACGAGCTTCTATCATGGTGCCTCCGCCGCCCCTTCATAGAGCGGCTTCCGCCGTCCTCTTGCACTTTGGTGACACTTGAGACGACGGAGGCGTTTGGGTTGGAGGCGGAGGATGTCAAGTACGTAACCCAGCACTTTCGCTACACATTCGTCAACGACAAGGTCAAACGTAGCGCCCGCTACTACTCCCCTGGCTGGCGTACTTGGGCTGCCGTTGCCATCCAGCTCGCCTGGCGTCGTTACCGCCACCGCCTTACGTTAACATCATTGTCGTTTATTCGGCCTCGGCGTCCCCTGTCGCGGTGCTCTTCCTTGGGGGAGGATCGCCTCCGCCTCTACACCGCGTTGCTTACTTCTCCCAAGCCCAATCAAGATCACTTCGATTTTTGA 1644 51.95 MATSSDEEVEKELQEHDGGFCRSLYGVGSVLDPRAKWVREWNRVFLLVSAAGLFVDPLFLYTLSISESWMCLFVDGWLAITLTVLRCTADAFHLWNMWLQLKTATRYSFAGGASTAATPENRGLRDSTPRAVALRYFKSKKGFFFDLFVILPLPQVVLWVVIPRIMKEGSVTLVMTVLLIVFLFQYLPKLYHSVCLLRRLQNLSGATSSCGVRVLSCKDRIFYGGKMGMGRDSARFDWASNRQPKFMCLDTADNFNYGAYKWTVQLVVNQSRLEKILFPIFWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLMRNLEWWMRKRHLPQGFRQRVRNFERQRWAAMRGVDECEMIKNLPEGLRREIKYHLCLDLVRQVPLFQHMDDLVLENICDRVNQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSCTLVTLETTEAFGLEAEDVKYVTQHFRYTFVNDKVKRSARYYSPGWRTWAAVAIQLAWRRYRHRLTLTSLSFIRPRRPLSRCSSLGEDRLRLYTALLTSPKPNQDHFDF 547
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4622628 4626735 + Cp4.1LG14g00210.1 Cpe14g00704 481088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00704 547 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 207 316 - -
Cpe14g00704 547 SUPERFAMILY cAMP-binding domain-like 316 464 IPR018490 -
Cpe14g00704 547 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 6 206 - -
Cpe14g00704 547 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 314 398 - -
Cpe14g00704 547 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 398 544 - -
Cpe14g00704 547 Gene3D Jelly Rolls 401 466 IPR014710 -
Cpe14g00704 547 Gene3D Helix hairpin bin 256 372 - -
Cpe14g00704 547 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 207 316 - -
Cpe14g00704 547 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 6 206 - -
Cpe14g00704 547 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 314 398 - -
Cpe14g00704 547 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 398 544 - -
Cpe14g00704 547 SUPERFAMILY Voltage-gated potassium channels 33 316 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02418 Cpe-Chr1:20101863 Cpe14g00704 Cpe-Chr14:4622628 3.83E-157 dispersed
Cpe14g00704 Cpe-Chr14:4622628 Cpe05g00811 Cpe-Chr5:5023238 1.61E-77 dispersed
Cpe14g00704 Cpe-Chr14:4622628 Cpe16g00526 Cpe-Chr16:6198876 9.18E-79 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00704 K05391 - csv:101207531 931.013