Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00738 ATGGCGGTGGCAGATATACAAAATCCTCTTCAAGGAGAAACCACATGCGGTACCCTATTGCAGAAACTGCAAGAAATTTGGGATGAAGTTGGTGAAAGTGATAAGGAACGAGATAAAATGCTGCTTCAGATAGATCAGGAATGTTTGGATGTCTACAAAAGGAAAGTTGAGCAAGCTGATAAGTCCAGGGCAAAGCTTCTGCAGTCTTTATCAGACGCAAAGCTTGAGCTTTCCAGTCTTCTATCTGCTCTTGGTGAAAAAAGTTTTTCTGAATTTCCTGAGAAGGCTTCTGGAACAATCAAAGAACAGCTTGCAGCCATAGCACCGGCTCTCGAACAGCTCTGGAAACAGAAAGAACAGAGGGTTAAGGAATTTTTTGATGTTCAATCAGAGATTCAGAAGATATGTGGGGAGATTTCTGGGAGTTTAAACCTTAGTGAGAATCCAGTGGTAGATGAATCTCATCTTTCGGTAGAAAAGCTCGACGAATACCAATGCCAACTCCAGGAACTGCAGAAAGAAAAGAGTGATAGATTGCACAAAGTTCTTGAATTCGTGAGCACCGTGCATGATCTCTGTGCCGTCCTTGGAATCGATTTCTTTGCTACTGTAACTGAGGTTCACCCAAGCTTAAATGACGCAACTGGTGTGCAATCTAAAAGCATTAGCAATGACACTTTATCCAAGCTGGCAAAGATGGTCTTAGCTCTGAAAGAAGATAAAAAGCAGAGGCTACATAAGCTTCAAGAATTGGCAACTCAGCTGATTGATCTTTGGAATTTAATGGACACCCCCTCGGAGGAAAGAAGTTTGTTTGACCATGTTACGTGTAACATATCAGCATCAGTAGATGAAGTGACTGTCCCAGGGGCGCTTGCTCTCGATTTGATTGAGCAGGCTGAGGTGGAGGTTGAGAGGCTTGATCAGCTCAAGGCTAGTAAGATGAAGGAAATTGCATTCAAGAAGCAGTCTGAACTTGAAGAGATATTTTCTCATGCTCACATAGAAGTAGACCCAGATGCAGCCCGAGACAAAATTATGGCACTGATTGATTCTGGTAACGTCGAGCCTGCTCAATTACTGGATGACATGGACGATCAAATAGCAAAGGCGAAAGAAGAAGTTCTCAGCAGGAAAGAAATATTGGACAAGGTTGAAAAATGGATGCTAGCATGTGAAGAAGAGAGCTGGCTAGAAGACTACAATCGGGATGATAACAGGTATAATGCTAGCAGAGGGGCTCATCTGAATCTCAAGCGAGCAGAGAAAGCTAGAATTCTGGTCAACAAAATTCCAGCTCTTGTTGACACTTTGATTGCCAAAACTCGGGCTTGGGAGGAAGATCGTGGCATATCGTTTATTTACGACGGTGTTCCTCTCCTCGCTATGCTAGACGAATATACCATGCTCAGGCATGAAAGGGAGGAAGAAAAACGACGATCAAGGGACCAGAAAAAATTCCACGAACAACAAAGCACAGACCAAGAGACCATCACCAATCCAAGGCCTAGCCCTGTTCGACCCGTTGGAACAAAGAAGGCAGCAGGGCCTCGTGCAAATGGAGCTGCGAACGGAACACCTAGCAGCAGACGGTTATCACTGAATCAGAATGGATCTAGATCAATGAATAAAGATGGAAGAAGGGATAGTATGAGACCAATGACACCCGTGAAGTACGATGCAATCTCGAAAGAAGACTCTGCGTCGCACTTTTCAGGTACGGAGCCTGTTTCATCCTCCTCACCATGA 1749 44.2 MAVADIQNPLQGETTCGTLLQKLQEIWDEVGESDKERDKMLLQIDQECLDVYKRKVEQADKSRAKLLQSLSDAKLELSSLLSALGEKSFSEFPEKASGTIKEQLAAIAPALEQLWKQKEQRVKEFFDVQSEIQKICGEISGSLNLSENPVVDESHLSVEKLDEYQCQLQELQKEKSDRLHKVLEFVSTVHDLCAVLGIDFFATVTEVHPSLNDATGVQSKSISNDTLSKLAKMVLALKEDKKQRLHKLQELATQLIDLWNLMDTPSEERSLFDHVTCNISASVDEVTVPGALALDLIEQAEVEVERLDQLKASKMKEIAFKKQSELEEIFSHAHIEVDPDAARDKIMALIDSGNVEPAQLLDDMDDQIAKAKEEVLSRKEILDKVEKWMLACEEESWLEDYNRDDNRYNASRGAHLNLKRAEKARILVNKIPALVDTLIAKTRAWEEDRGISFIYDGVPLLAMLDEYTMLRHEREEEKRRSRDQKKFHEQQSTDQETITNPRPSPVRPVGTKKAAGPRANGAANGTPSSRRLSLNQNGSRSMNKDGRRDSMRPMTPVKYDAISKEDSASHFSGTEPVSSSSP 582
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5545849 5551331 + Cp4.1LG14g07370.1 Cpe14g00738 481122

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00738 582 Coils Coil 238 258 - -
Cpe14g00738 582 Gene3D - 152 208 - -
Cpe14g00738 582 Coils Coil 56 76 - -
Cpe14g00738 582 Coils Coil 154 181 - -
Cpe14g00738 582 MobiDBLite consensus disorder prediction 522 541 - -
Cpe14g00738 582 Pfam Microtubule associated protein (MAP65/ASE1 family) 18 505 - -
Cpe14g00738 582 Gene3D - 367 499 - -
Cpe14g00738 582 MobiDBLite consensus disorder prediction 567 582 - -
Cpe14g00738 582 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 5 579 IPR007145 GO:0000226|GO:0008017
Cpe14g00738 582 MobiDBLite consensus disorder prediction 474 582 - -
Cpe14g00738 582 Coils Coil 297 317 - -
Cpe14g00738 582 MobiDBLite consensus disorder prediction 474 492 - -
Cpe14g00738 582 PANTHER 65-KDA MICROTUBULE-ASSOCIATED PROTEIN 1 5 579 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00738 K16732 PRC1, ASE1, MAP65; Ase1/PRC1/MAP65 family protein - csv:101217855 1037.71
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01863 Cpe-Chr1:15955308 Cpe14g00738 Cpe-Chr14:5545849 2.43E-174 dispersed
Cpe09g00478 Cpe-Chr9:3148842 Cpe14g00738 Cpe-Chr14:5545849 0 dispersed
Cpe11g00365 Cpe-Chr11:2009521 Cpe14g00738 Cpe-Chr14:5545849 3.56E-104 dispersed
Cpe14g00145 Cpe-Chr14:798963 Cpe14g00738 Cpe-Chr14:5545849 1.48E-132 dispersed
Cpe14g00738 Cpe-Chr14:5545849 Cpe13g00434 Cpe-Chr13:4675925 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g576 . Blo03g01459 . . . . . Bma13g01091 Cmo16g00948 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Blo10g00849 . Bda12g00935 . . . . . . . . Cma16g00913 . Car16g00886 Cpe14g00738 . . . . . . . . . . . . . . . . . Chy06g01848 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003979 3 1 2 4 2 1 2 1 1 1 1 1 1 1 1 2 1 3 1 1 1 1 1 1 1 1 1 3 2 1 44
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cpe14g00738 Cpe_Chr14 FPKM 0.233062 0.406697 5.447464 4.131912 0.0 0.0 0.0 0.0 0.328003 0.0