Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00744 ATGGGTACAAGACTTAAGCTTTTTACAGCCTTGCTCTTCATTTGCTTCCTTATGTTTCCAATGGTGTTTTCTGCATCTAACGATGGGAAGGTTAGAATTGGACTGAAACGGAGGAAGTTCGGCCAGAACATTCGAGTTGCTAGCAAGATTGCAACCAAGGAAGGAGTTTCCTTGAAAAATTCTGTTGAGAAATTGGGAGATTCAGCTGATACTGATATTGTAGCATTGAAGAATTACTTGAATGCTCAGTATTTTGGTGAGATTGGTATTGGTACGCCCCCTCAGAAGTTTACTGTTATTTTTGACACTGGCAGTTCAAATTTGTGGGTTCCATCATCCAAGTGCTTCTCTGTTGCTTGTCTACTCCATTCCAAGTACAAGTCAAAGCGTTCAAGTACTTACGAAAAGAATGGTAAACATGCTTCGATTCAATATGGGACTGGTGCTATTTCTGGCTACTTCAGTGAAGACCATGTTAAAGTTGGCGACCTAATAGTTAAGAAACAGGAATTTATCGAGGCAACTAAGGAACCCAGCCTCACGTTTGTACTTGCCCAATTTGATGGCATACTTGGACTTGGCTTTAAAGAGATCTCAGTTGGAGATGCAGTGCCTGTATGGTACAACATGGTTGACCAAAACCTTGTAAAGGAACCTGTTTTCTCGTTTTGGTTCAATCGAAATGAAGATGAGGAACAAGGCGGTGAAATTGTCTTTGGTGGTGTCGATCCAAATCACTACAAGGGGGAGCATACATATGTTCCAGTTACCAAAAAAGGATATTGGCAGTTTGATATGGGCGATGTCCTGATCAATGGGAGTACCACTGAATTTTGTTCAGGTGGTTGCTCAGCTATTGCTGATTCAGGAACTTCTTTGTTGGCTGGTCCAACGTCTATTATTACTCAAGTTAATCATGCCATTGGGGCCTCGGGGGTCGTAAGTGAGGAATGCAAGACTGTAGTTGCAGAATATGGAGAAACCATAATCAAAATGCTATTAGCAAAGGATCAACCCAAGAAAATCTGCTCTACACTTGGTTTGTGTACTTTTGACGGGACGCGTGGTGTAAGTATGGGGATTGAGAGCGTTGTGGATAACACGACACAGAAATCTTCGAATGGGTTGCATGATGTTATGTGCAACGCATGTGAGATGGCAGTTGTATGGGCACAAAGCCAGCTAAAGGATGAGAAAACACAAGACCAGATTCTTAATTATATAGATGGGCTCTGCGAGAAGCTGCCCAGTCCAATGGGAGAATCAGTAATTGATTGTGATTCCTTGTCTACTTTGCCTTCCGTTTCATTTACCATTGGTGGGAAGGTCTTTGATCTTAAGCCTGAGCAGTATGTGCTCAAAGTCACCCAGGGACCTGTAACTGAATGCATCAGTGGATTTGCAGCTCTGGACGTGCCACCTCCACGGGGACCCCTCTGGATCTTGGGGGATGTTTTCATGGGTACCTACCATACTGTATTTGACTATGGAAACTTGAGAGTTGGATTTGCAGAAGCTGCTTAA 1524 43.04 MGTRLKLFTALLFICFLMFPMVFSASNDGKVRIGLKRRKFGQNIRVASKIATKEGVSLKNSVEKLGDSADTDIVALKNYLNAQYFGEIGIGTPPQKFTVIFDTGSSNLWVPSSKCFSVACLLHSKYKSKRSSTYEKNGKHASIQYGTGAISGYFSEDHVKVGDLIVKKQEFIEATKEPSLTFVLAQFDGILGLGFKEISVGDAVPVWYNMVDQNLVKEPVFSFWFNRNEDEEQGGEIVFGGVDPNHYKGEHTYVPVTKKGYWQFDMGDVLINGSTTEFCSGGCSAIADSGTSLLAGPTSIITQVNHAIGASGVVSEECKTVVAEYGETIIKMLLAKDQPKKICSTLGLCTFDGTRGVSMGIESVVDNTTQKSSNGLHDVMCNACEMAVVWAQSQLKDEKTQDQILNYIDGLCEKLPSPMGESVIDCDSLSTLPSVSFTIGGKVFDLKPEQYVLKVTQGPVTECISGFAALDVPPPRGPLWILGDVFMGTYHTVFDYGNLRVGFAEAA 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5651759 5656520 + Cp4.1LG14g07420.1 Cpe14g00744 481128

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00744 507 Pfam Saposin-like type B, region 1 380 416 IPR007856 GO:0006629
Cpe14g00744 507 SUPERFAMILY Acid proteases 11 506 IPR021109 -
Cpe14g00744 507 Pfam Saposin-like type B, region 2 317 349 IPR008138 -
Cpe14g00744 507 Gene3D - 313 416 - -
Cpe14g00744 507 ProSiteProfiles Saposin B type domain profile. 377 418 IPR008139 -
Cpe14g00744 507 ProSiteProfiles Peptidase family A1 domain profile. 84 504 IPR033121 -
Cpe14g00744 507 SUPERFAMILY Saposin 314 416 IPR011001 -
Cpe14g00744 507 Gene3D Acid Proteases 31 241 IPR021109 -
Cpe14g00744 507 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 99 110 IPR001969 GO:0004190|GO:0006508
Cpe14g00744 507 PANTHER ASPARTIC PROTEINASE A1-LIKE 8 507 - -
Cpe14g00744 507 Gene3D Acid Proteases 242 507 IPR021109 -
Cpe14g00744 507 PRINTS Pepsin (A1) aspartic protease family signature 90 110 IPR001461 GO:0004190|GO:0006508
Cpe14g00744 507 PRINTS Pepsin (A1) aspartic protease family signature 235 248 IPR001461 GO:0004190|GO:0006508
Cpe14g00744 507 PRINTS Pepsin (A1) aspartic protease family signature 285 296 IPR001461 GO:0004190|GO:0006508
Cpe14g00744 507 PRINTS Pepsin (A1) aspartic protease family signature 480 495 IPR001461 GO:0004190|GO:0006508
Cpe14g00744 507 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 8 507 IPR001461 GO:0004190|GO:0006508
Cpe14g00744 507 Pfam Eukaryotic aspartyl protease 83 506 IPR033121 -
Cpe14g00744 507 CDD phytepsin 74 505 IPR033869 GO:0004190
Cpe14g00744 507 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 285 296 IPR001969 GO:0004190|GO:0006508
Cpe14g00744 507 ProSiteProfiles Saposin B type domain profile. 313 353 IPR008139 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00744 K08245 E3.4.23.40; phytepsin [EC:3.4.23.40] - csv:101222990 966.066
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00919 Cpe-Chr9:8290562 Cpe14g00744 Cpe-Chr14:5651759 0 dispersed
Cpe14g00744 Cpe-Chr14:5651759 Cpe05g01173 Cpe-Chr5:8014365 5.61E-11 dispersed
Cpe14g00744 Cpe-Chr14:5651759 Cpe20g00354 Cpe-Chr20:1996218 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g539 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone14ag1160 Cone15ag1176 . . . . . . . . . . . . . . . . . . . Cpe14g00744 . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000456 7 5 6 5 6 2 4 2 4 3 2 4 3 3 3 4 4 6 3 4 3 3 3 3 3 3 3 5 5 5 116
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cpe14g00744 Cpe_Chr14 FPKM 10.180919 12.040009 4.839807 5.558886 2.480061 1.567358 2.333997 1.244025 2.084683 2.116217