Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00748 ATGGCTTCTTCTGATTTATGGTTAAGGGAATATAATGAAGCCTCTAAGCTTGGGGATGATATCAATGGCATGATTTCTGAAAGAAGTTCCGTTCCTGCAACTGGACCAGAAGCTCAACGTCATGCCTTCGCGATTCGGAGGAAAATCACGATTTTGGGGACTAAAGTTGATGGCTTAGAGTCCCTTTTGTTGAAGCTTCCTGTAAAGCAGCCCCTTTTGCTTGGCCCGGATATGAAATCAGCGGATGTAATGAGCAAAACAGCTGAACTAGACAACCAAGGACTTGTTGAGCAAGATGAAGGTCTTGAAAAGTTGGAGGAGACTATAAGAAGTACAAAACATATTGCTTTGGCAGTTAATGAAGAACTCGATCTTCATACTCGCCTAATTGATGACTTAGACCAGCATGTCGATGTTACAGACTCTCGATTAGCGGTAAAATTCTCTCTTACTATTCATTTTATGCTTTAG 471 41.4 MASSDLWLREYNEASKLGDDINGMISERSSVPATGPEAQRHAFAIRRKITILGTKVDGLESLLLKLPVKQPLLLGPDMKSADVMSKTAELDNQGLVEQDEGLEKLEETIRSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLAVKFSLTIHFML 156
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5704118 5706363 - Cp4.1LG14g07520.1 Cpe14g00748 481132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00748 156 SUPERFAMILY SNARE fusion complex 91 145 - -
Cpe14g00748 156 Gene3D - 94 148 - -
Cpe14g00748 156 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 1 72 - -
Cpe14g00748 156 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 73 145 - -
Cpe14g00748 156 PANTHER SYNTAXIN 1 72 IPR045242 -
Cpe14g00748 156 PANTHER SYNTAXIN 73 145 IPR045242 -
Cpe14g00748 156 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 92 144 IPR000727 -
Cpe14g00748 156 Coils Coil 102 122 - -
Cpe14g00748 156 CDD SNARE_Qc 97 144 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe06g00787 Cpe14g00748 CCT
Cpe02g00792 Cpe14g00748 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00787 Cpe-Chr6:5008423 Cpe14g00748 Cpe-Chr14:5704118 9.68E-58 dispersed
Cpe14g00748 Cpe-Chr14:5704118 Cpe02g00792 Cpe-Chr2:5071070 1.25E-62 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00748 K08503 - csv:101223140 232.646