Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00775 ATGACTACTGCAGCTCGACCAACATGGGCACCGGCTAAAGGTGGAAATGAACAAGGTGGCACTCGAATTTTCGGCCCATCCCAGAAATATTCATCCAGGGATATTGCTTCTCATACGACCTTGAAACCCAGAAAGGAAGGTCAAGATACCCATGATGAATTGCAGAGGAGGAATCTCAGGGACGAGTTGGAAGATCGTGAAAGGAGGCATTTTTCATCAAAGAATAAGTCATATGATGATAGAGAACATAGAAAAGGAAGCCAACTTCTGTTAGAAGGTGGAAAGAGAGATATCGAAGATCGGATTATTCCACGAAGTTTAGATGCTGACGATTCTGATGTGGATGTCAAAAGTGACAGTGAGAGTGATGACGACGACGAAGACGATGATGAGGATGATACTGAAGCTCTTTTGGCTGAGCTGGAACAAATAAAGAAGGAAAGAGCAGAGGAAAAGCTTCGGAAGGAAAGACAGGAGCGTGAGGAAGAGCTTAAAGTCAAAGAAGCGGAGTTACTCCGAGGAAATCCGCTGCTGAATGAGCAGCCCGCCTCTTTTAGTGTCAAAAGAAGATGGGATGATGATGTTGTGTTCAAGAATCAGGCCCGTGGTGAAACAAAGACTCCGAAGCGCTTTATAAACGACACCATTAGGAATGACTTCCACCGAAAATTCTTGCATAAGTACATGAAGTAA 693 44.16 MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDREHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDSESDDDDEDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYMK 230
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 6109843 6116698 + Cp4.1LG14g07730.1 Cpe14g00775 481159

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00775 230 PANTHER - 1 230 - -
Cpe14g00775 230 Coils Coil 127 170 - -
Cpe14g00775 230 MobiDBLite consensus disorder prediction 38 113 - -
Cpe14g00775 230 Pfam Cwf15/Cwc15 cell cycle control protein 1 230 IPR006973 GO:0000398|GO:0005681
Cpe14g00775 230 MobiDBLite consensus disorder prediction 1 134 - -
Cpe14g00775 230 MobiDBLite consensus disorder prediction 114 134 - -
Cpe14g00775 230 MobiDBLite consensus disorder prediction 21 37 - -
Cpe14g00775 230 PANTHER CELL CYCLE CONTROL PROTEIN CWF15 1 230 IPR006973 GO:0000398|GO:0005681
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00775 K12863 CWC15; protein CWC15 - csv:101218170 339.732
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe14g00775 Cpe-Chr14:6109843 Cpe08g00842 Cpe-Chr8:6686866 4.96E-120 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g712 . . . . Bpe09g00112 . Bma10g00599 Bma13g01129 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Blo10g00877 Bda05g00675 . . . . . . . . . . . . Cpe14g00775 . . . . . . . . . . . . . . . Lsi05g00514 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011554 1 1 2 3 1 1 2 1 1 1 0 0 0 1 1 1 0 1 2 0 1 1 1 1 1 0 0 2 1 1 29
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cpe14g00775 Cpe_Chr14 FPKM 0.0 0.0 1.885255 1.599353 475.737335 506.773376 459.5672 0.387728 0.131844 0.229898