Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00818 ATGGGGAGGAATGATGATAATGTTGCTATTATTGGGGATTGGGTGCCTCCAAGTCCCAGCCCAAGAACCTTCTTCTCAGCAATGCAAATGCTAGAGGAGGATGTTGCTGGTTCTAGACCCACTGATAAACCCGAAAAACTCTTTCTCGGGTCTCGAGAACACACGGTGACTGAAAACGACATTGCAAGAGGCGGGATCCCGGGTGTTAACTCTGGCGATCGGTCGACGGAGTTCGGTACGGTATCGGAGCAGAAGCGTGGGGGACTTGTGGAAAGGATTGCAGCAAGAGCTGGATTTAATGCTCCAAGATTGAATACAGAGAACATTAGATCAACAGAGGAAGTGAAGTCTCCTTACTTGACAATACCGCCTGGTTTGAGTCCAACTACATTGCTTGATTCTCCAGTTTTTCTTTCAAATTCATTGGCTCAGCAATCTCCCACAACTGGGAAGTTCCCGTTTGTAGCGAACGTTAGTTATCGAAGCTCGACGATGATGTTGGAGGCGAACAATCGAGGCAACGACAATCCGTTCGATGATAATAGTTCATCGTTTGCTTTCAGACCGAGTGTGGAATCAGGATCATTTTTTCATGGTGCAGCAAGCAAAGTAATTTCGCTTCCACAATCTTGTCCAAGAATTGAGGTTCCGGGTCTACGCTCAGAAAATTCTTATCAACCCGAAAATAGAATCAATCATCATCCTCAAATGGGGCTCTCTATGTCGTGCACGGAGAGGGACGATGGGGGTAAGAATGTGTTGGATGATCAAAGACCCTTTGATTCTGTGTGTGGTAGTGGTGGGGGTGGTGGTGAACATTCTTCACCGCTCGACGAGCAACCGGATGAAGGGGAGCAACGAGGCACTGGGGATTCGATGGCCGGTGGTGGTTGTGGTGCACCCTCGGAGGATGGATATAACTGGAGAAAATATGGACAAAAACAGGTTAAAGGAAGCGAGTATCCTCGGAGTTATTACAAGTGCACACATCCGAACTGTCAGGTCAAGAAGAAGGTCGAGCGATCTCATGAAGGCCATATAACAGAGATCATCTATAAAGGAACGCATAACCACGTAAAACCCTCACCGAATCGACGAGCATCGGATTCCCATATCAATATGCAACAAGCAGGCCAACAGAATGCCGAAGTTCCCCTGTGGGAAGATTCACAAAAAGGGACTCCCGATTGGATGCATAGCAACCTTGAGGTGAGTTCTTCAGCATCATTGGGTCCTGAATATGGCAATCATATTGAAACAGTTGAGGCCATTGATGCCTCATCCACATTCTCTAATGATGAAGATGAAGATGATAGAGGAACACATGGAAGTATAACAATGGGATATGAGGGGGAAGGAGATGAATCCGAGTCGAAGAAAAGGAAACTCGACGCCTATGTAACGGAGATGAGTGGGGCTACTAGAGCTATCCGTGAGCCTAGAGTTGTTGTTCAGACTACCAGTGAAGTAGATATTCTCGACGATGGCTATCGTTGGCGTAAATACGGACAGAAGGTGGTGAAGGGAAATCCGAATCCTAGGAGTTACTACAAGTGCACGAATCCTGGCTGCACGGTGAGGAAGCATGTCGAGCGAGCGTCACATGACCTGAAGTCAGTGATAACCACATATGAAGGAAAGCACAATCACGATGTTCCTGCTGCTCGCAACAGCAGCCACATCAGTTCATGCACATCCAGTCCAGTAACGGGTCAAAACTCGACCACTACTCATGCTCACAGGCCAGGGCCACCGCAGTCTCAAAACAACATGCCAAGATTCGAAAGGCCAGCCTTCGGCCTTGCTGGAAGACAACCGATGGGCACTGCCCATGCCCATGGCTTCGGTTTTGGTATGAACCAACCTGGACTGAGAAATCTAAACCTGACCATGACCATGGCATCAGCTGGTCAAGCCAAGCTTCCTGTTCTACCAATGCATCCATACTTAGCACAAGCACACAATGTTCATGAAATGGGTTTGTTGTTGCCTAAAGGTGAGCCCAATCTAGAACCTACATCTGATCTTGGCTTCAACTTTTCCAATGGTTCAACAGCGTATCAGCAAATTATGAGTAGGCTTCCACTTGGGCCTGAGATGTGA 2103 47.65 MGRNDDNVAIIGDWVPPSPSPRTFFSAMQMLEEDVAGSRPTDKPEKLFLGSREHTVTENDIARGGIPGVNSGDRSTEFGTVSEQKRGGLVERIAARAGFNAPRLNTENIRSTEEVKSPYLTIPPGLSPTTLLDSPVFLSNSLAQQSPTTGKFPFVANVSYRSSTMMLEANNRGNDNPFDDNSSSFAFRPSVESGSFFHGAASKVISLPQSCPRIEVPGLRSENSYQPENRINHHPQMGLSMSCTERDDGGKNVLDDQRPFDSVCGSGGGGGEHSSPLDEQPDEGEQRGTGDSMAGGGCGAPSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSHEGHITEIIYKGTHNHVKPSPNRRASDSHINMQQAGQQNAEVPLWEDSQKGTPDWMHSNLEVSSSASLGPEYGNHIETVEAIDASSTFSNDEDEDDRGTHGSITMGYEGEGDESESKKRKLDAYVTEMSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARNSSHISSCTSSPVTGQNSTTTHAHRPGPPQSQNNMPRFERPAFGLAGRQPMGTAHAHGFGFGMNQPGLRNLNLTMTMASAGQAKLPVLPMHPYLAQAHNVHEMGLLLPKGEPNLEPTSDLGFNFSNGSTAYQQIMSRLPLGPEM 700
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 6556851 6560228 + Cp4.1LG14g08130.1 Cpe14g00818 481202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00818 700 MobiDBLite consensus disorder prediction 555 593 - -
Cpe14g00818 700 ProSiteProfiles WRKY domain profile. 303 361 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe14g00818 700 Gene3D WRKY domain 480 546 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe14g00818 700 SUPERFAMILY WRKY DNA-binding domain 485 553 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe14g00818 700 SUPERFAMILY WRKY DNA-binding domain 301 361 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe14g00818 700 MobiDBLite consensus disorder prediction 219 307 - -
Cpe14g00818 700 MobiDBLite consensus disorder prediction 547 594 - -
Cpe14g00818 700 MobiDBLite consensus disorder prediction 428 461 - -
Cpe14g00818 700 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 72 201 IPR044810 GO:0003700
Cpe14g00818 700 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 289 649 IPR044810 GO:0003700
Cpe14g00818 700 Gene3D WRKY domain 298 362 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe14g00818 700 ProSiteProfiles WRKY domain profile. 488 553 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe14g00818 700 SMART WRKY_cls 493 552 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe14g00818 700 SMART WRKY_cls 302 360 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe14g00818 700 PANTHER BNAA03G10980D PROTEIN 289 649 - -
Cpe14g00818 700 PANTHER BNAA03G10980D PROTEIN 72 201 - -
Cpe14g00818 700 MobiDBLite consensus disorder prediction 222 239 - -
Cpe14g00818 700 Pfam WRKY DNA -binding domain 494 550 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe14g00818 700 Pfam WRKY DNA -binding domain 303 358 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01491 Cpe-Chr1:8901402 Cpe14g00818 Cpe-Chr14:6556851 8.95E-82 dispersed
Cpe03g00149 Cpe-Chr3:753145 Cpe14g00818 Cpe-Chr14:6556851 2.88E-58 dispersed
Cpe08g00850 Cpe-Chr8:6729186 Cpe14g00818 Cpe-Chr14:6556851 5.11E-94 dispersed
Cpe09g00203 Cpe-Chr9:1176967 Cpe14g00818 Cpe-Chr14:6556851 6.56E-68 dispersed
Cpe14g00767 Cpe-Chr14:6036846 Cpe14g00818 Cpe-Chr14:6556851 3.09E-73 dispersed
Cpe14g00818 Cpe-Chr14:6556851 Cpe18g00254 Cpe-Chr18:4198269 1.21E-109 dispersed
Cpe03g00029 Cpe-Chr3:148105 Cpe14g00818 Cpe-Chr14:6556851 3.25E-82 transposed
Cpe14g00818 Cpe-Chr14:6556851 Cpe08g00812 Cpe-Chr8:6472290 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50544 PF03106 WRKY 2.80E-24 CL0274 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00818 K18835 - csv:101207853 1090.1