Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00825 ATGTTGGCTGGGTGTTCTAGTTCAACATTGCTCTCGCCAAGGAATCATTTGAGAAGTGAAGTAGTACAGTCGCCGTTTCAAGCTTGCCTTTTGCAGTTTCCCCCTTCAATGAGCGCACAGAGATTGGATTTGCCCTGCAGCTTTTCCCGCTCAAAAGACGCCTCTTCCGTCGCTCGATCCCCGTCGATCCGCCCGGTTTCTCTCTCGGTCGAGAAGCAGGACATTAGGCTTCCGCCGCTATCCGCTACTAACCAGAAAATCAAGCAAGAGTTTTGGAATGGGAAAGGTAAGAACTTGAAGAGAATTGCAGAGCAAGTTGGGATTGATGATGATGAATCTTCCATTAGCAATGCCAAGAGGAAGAGAGCGTGCAGAGACGACGTAGGAGACGGGCTAATTCTGAGCCAATTCGGCGGTGGGGTTCGGAGTTTCTGGTATCATCAACAGCCTGATGGAGATGAAGGACTCTGCTTTCTTCCTGGAAGTTCAACGTCGCAGTTTATGTCGAAGATTGCTGATTTGGGAGAAGGACATGACGGAGAAAGCAGCCATGTGAAGGCGCAGGACGGCTCGGACTCGGTCTCCGGTTCAGATTCGGGGTCGAGTTCATCATCAAGAAGTGAGAGATTTGCAGCAGCAGAAGCAGGGCCAGAAATTGGAAATGGGAGCTCAAGAAATCCTTCATATCATCACCATCAAGGCTCTGGCTTAGCAAATGAGAGAGGAGAAGAAGAATCATTTGAGCTGTTAAGTGTTTTAATGGCATGTGTGGAAGCAATAAGATCAAAGAACATTACTTTGATTAACCATTTGATAGAAAAACTTGGGAGCCAAGCTTCACCAAGAGGTTCATCACCCATTACACGTTTGATTGCATATTACACAGAGGCTTTAGCAGTAAGAGTGAGCAGAGTTTGGCCACAAGTGTTTCACGTAAGGCCGCCGAGGGAATACGATCGGATCGACGACGATACAGGAACAGCGTTACGTCTTCTAAACGAGGTGAGTCCGATCCCGAAATTCATCTACTTCACAGCAAATGAGATGTTGCTGAGAGCATTTGAAGGGAAAGACAAGGTTCACATCATAGACTTTGACATAAAGCAAGGGCTGCAATGGCCGAGCTTGTTTCAGAGTTTGGCATCTCGAGCGAACCCTCCGAGTCATGTCCGAATCACCGGGATCGGTGAATCAAAGCAGGAATTGAACGAAACGGGAGATAGGCTGGCGGGGTTCGCCGAGGCATTGAGGTTGCCGTTCGAGTTCCACGCCGTGGTGGACCGGTTGGAGGATGTGAGACTATGGATGCTTCATGTCAAGGAGAATGAGAGTGTAGGAGTGAATTGCATTCTCCAACTGCACAAGACTCTGTATGATAATAACATCAATGGTGGGGGAGGAGCATTGAAGGACTTTTTGGGGCTTATCAGAAGCACGAACCCGAGCATTGTTGTGATGGGCGAGCAAGAAGCCGAGCACAACGACCCGAGATTGGAGACTCGAGTTGCAGCCACACTTAAGTACTACGGTGCGATATTCGACTCCCTCGACACTAGCCTTCCACCGGACAGCTCGGGGAGGTTGAAAATCGAGGAGATGTTCGGGAGGGAGATAAGGAACATGATAGGATGTGAAGGAAGGGAGAGGTATGAAAGGCATGTTGGATTTGAGAAATGGAAGAAAGTGATGGAGAAGCAAGGAGGGCTGCGATGCGTCGGGATTCGAGACGATCGAGAGCTTCTTCAGAGCCAAATCCTGTTGAAAATGTACTCATCAGCTGATGGATTCAAAGTGAGAAAGATTGAAGAAGAAGGAGGAGCTCAAGCAGTTTGCTTAGCTTGGGAAGAACAGCCACTTTACAGTGTGTCAGGATGGACAGCAGCAGAAGTATCTTGA 1896 48.52 MLAGCSSSTLLSPRNHLRSEVVQSPFQACLLQFPPSMSAQRLDLPCSFSRSKDASSVARSPSIRPVSLSVEKQDIRLPPLSATNQKIKQEFWNGKGKNLKRIAEQVGIDDDESSISNAKRKRACRDDVGDGLILSQFGGGVRSFWYHQQPDGDEGLCFLPGSSTSQFMSKIADLGEGHDGESSHVKAQDGSDSVSGSDSGSSSSSRSERFAAAEAGPEIGNGSSRNPSYHHHQGSGLANERGEEESFELLSVLMACVEAIRSKNITLINHLIEKLGSQASPRGSSPITRLIAYYTEALAVRVSRVWPQVFHVRPPREYDRIDDDTGTALRLLNEVSPIPKFIYFTANEMLLRAFEGKDKVHIIDFDIKQGLQWPSLFQSLASRANPPSHVRITGIGESKQELNETGDRLAGFAEALRLPFEFHAVVDRLEDVRLWMLHVKENESVGVNCILQLHKTLYDNNINGGGGALKDFLGLIRSTNPSIVVMGEQEAEHNDPRLETRVAATLKYYGAIFDSLDTSLPPDSSGRLKIEEMFGREIRNMIGCEGRERYERHVGFEKWKKVMEKQGGLRCVGIRDDRELLQSQILLKMYSSADGFKVRKIEEEGGAQAVCLAWEEQPLYSVSGWTAAEVS 631
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 6679421 6681316 - Cp4.1LG14g08250.1 Cpe14g00825 481209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00825 631 ProSiteProfiles GRAS family profile. 240 626 IPR005202 -
Cpe14g00825 631 Pfam GRAS domain family 250 626 IPR005202 -
Cpe14g00825 631 PANTHER SCARECROW-LIKE PROTEIN 28 6 628 IPR030027 -
Cpe14g00825 631 MobiDBLite consensus disorder prediction 187 209 - -
Cpe14g00825 631 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 628 IPR005202 -
Cpe14g00825 631 MobiDBLite consensus disorder prediction 174 240 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe08g00851 Cpe14g00825 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe14g00825 Cpe-Chr14:6679421 Cpe01g02589 Cpe-Chr1:21009953 1.48E-76 dispersed
Cpe14g00825 Cpe-Chr14:6679421 Cpe13g00364 Cpe-Chr13:3951163 4.82E-66 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50545 PF03514 GRAS 5.00E-120 CL0063 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00825 - - cmo:103490990 978.393