Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00834 ATGGCATCTTCAAGGTCTCCGAATGGATCGTCTGACGATATTGTTGATACCTCCCCCTTGATGGGGAATTCGAATCGGTCGCTTGATGAAACGCATTCGGGTCGGCGATTTGTGCAGAGGCAAAGTCTGCGTCAGGCGGCGAGGTTTCTGAGGCAGGCGAGTAGTCGGAGGACGATGCGTGAGCCGTCTATGTTGGTCCGAGAGACAGCTGCGGAGCAATTGGAGGAGAGGCAGAGTGATTGGGCGTATTCGAAGCCGGTTGTCATCCTTGACATCGTCTGGAATTTCGCTTTTGTTGTTGTTGCTGCTACCGTTTTGGTTCTGAGCCGCAACGAGTCTCCTACAATGCCTTTGAGGTTGTGGATTGTGGGGTATGCGTTTCAATGCATTCTCCATATGGTGTGTGTTATTGTGGAGTATCGTCGCCGCCAGCAGCGGCGCTATTCAGACTTCAATTCGATGGATGAGGGAAATTCTGCACGCGGGCTTTCCGGTTTGGGGTCGAGAGGGAACTCGAGTCATTATGTATCATTGGCGCACCTGGATGATAACGACACCAGTGTAGCAAAGCACCTGGAATCTGCAAATACTATGTTTTCCTTCATCTGGTGGATTATTGGATTCTACTGGGTATCTGCAGGAGGCCAATCTTTAGCACACGTCTCCCCTCTGCTTTACTGGTTATGCATCATATTCTTGGGTTTTGATGTCTTCTTTGTGGTCTTCTGTGTTGCTTTGGCATGTATCATTGGAATCGCTGTTTGCTGTTGTCTTCCCTGTATCATTGCACTTTTATATGCTGTAGCAGACCAGGAAGGAGCAACCAAAGAAGATGTTGAACAGTTGTCAAAATTTACATTCAGAAAGGTTGATGATGCAGAGAAATTCTCCGCTGATGTACAGGAACCTCTTGGTGGCATAATGATCGAGTGTAGTACAGATTCACCCATTGAACGTGCCCTCTCACAGGAGGATGCGGAGTGCTGCATCTGTCTTTCTGCATATGAGGATGGCGTCGAGCTACGAGAGCTTCCGTGTGGTCACCATTTCCACTGTGCCTGTGTCGATAAGTGGCTGTATATTAATGCTACCTGTCCTCTCTGCAAGTACAACATCCTGAAAAGTAGCAATATTGCTCAAGAGGAAGTTTGA 1152 48.18 MASSRSPNGSSDDIVDTSPLMGNSNRSLDETHSGRRFVQRQSLRQAARFLRQASSRRTMREPSMLVRETAAEQLEERQSDWAYSKPVVILDIVWNFAFVVVAATVLVLSRNESPTMPLRLWIVGYAFQCILHMVCVIVEYRRRQQRRYSDFNSMDEGNSARGLSGLGSRGNSSHYVSLAHLDDNDTSVAKHLESANTMFSFIWWIIGFYWVSAGGQSLAHVSPLLYWLCIIFLGFDVFFVVFCVALACIIGIAVCCCLPCIIALLYAVADQEGATKEDVEQLSKFTFRKVDDAEKFSADVQEPLGGIMIECSTDSPIERALSQEDAECCICLSAYEDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKSSNIAQEEV 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 6771794 6778915 - Cp4.1LG14g08390.1 Cpe14g00834 481218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00834 383 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 313 382 IPR013083 -
Cpe14g00834 383 MobiDBLite consensus disorder prediction 1 35 - -
Cpe14g00834 383 CDD RING-H2_RNF111_like 327 371 - -
Cpe14g00834 383 SUPERFAMILY RING/U-box 318 375 - -
Cpe14g00834 383 ProSiteProfiles Zinc finger RING-type profile. 328 369 IPR001841 -
Cpe14g00834 383 SMART ring_2 328 368 IPR001841 -
Cpe14g00834 383 MobiDBLite consensus disorder prediction 1 28 - -
Cpe14g00834 383 Pfam Ring finger domain 327 369 IPR001841 -
Cpe14g00834 383 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 6 383 - -
Cpe14g00834 383 PANTHER TARGET OF ERK KINASE MPK-1 6 383 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe08g00516 Cpe14g00834 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe13g00346 Cpe-Chr13:3434254 Cpe14g00834 Cpe-Chr14:6771794 1.42E-93 dispersed
Cpe14g00834 Cpe-Chr14:6771794 Cpe08g00793 Cpe-Chr8:6289601 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00834 - - csv:101209228 685.256