Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00866 ATGGTGGCTTATGCGAATCGGCATGCGTTCAGCAATGTGCCGCAAGTTGTTAGAGAGAAGAGGAGAGAGAGGAAGATGCTTAATCAATTGGAGAGGAAAGGTGTGATTAAATCGATTGAGCCGTATCTGTGTCGTGTTTGTGGGAGAAATTTCTATGCGAATGAGAAGTTAGTGAATCATTTTAAGCAAATTCATGAGAGTGAGCATAAGAAGAGGTTGAATCAGATCGAATCTGCCAAGGGTAGTAGAAGAGTGAAGTTGCTCGCTAAGTATTCGATGAAAATACAGAAGTATAAGAATGCTGCTAGGGATGTTTTGACTCCGAAAGAGGGATATGGTCTAGCAGATGAGTTGAAGAGGGCAGGGTTTTTTGTGAAGACTGTGTCGGATAAGCCTGAAGCTGCCGATGTAGAATTGAGAAACGACATGGTTGAGGTCATGGATAGGAGAAGAGCAGAGTGTTTGGTTCTTGTATCAGATGATTCTGATTTTGTGAATGTTTTGAAGGAGGCCAAGTTGAGATGTCTTAGAACAGTTGTTGTTGGGGATCTTAATGATGGGCCATTGAAGAGAAATGCTGATACTGGGTTTTCTTGGAAGGAGATTTTAATGGGGAAGGCTAAGAAGGCGGCTGTGTCTGTTGTGGGAAAATGGAAGGATCGGGACGTTTTGAAGAGATTGGAATGGACATACAATCCTGAATTGGAGAAGGAAGTGTTTGGTTTGGATGATGATATGGGCGAGGATGAAGATGTTGAACAAGGTTCGGTTGATGAGAATATGACAAATGGTGACAGTGGTGCTTGGTGGGATCTCAGCTCTGATGCTAAAACTGAAGCTGTGTCGTCACGATCATGTAAATGA 864 42.82 MVAYANRHAFSNVPQVVREKRRERKMLNQLERKGVIKSIEPYLCRVCGRNFYANEKLVNHFKQIHESEHKKRLNQIESAKGSRRVKLLAKYSMKIQKYKNAARDVLTPKEGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEVMDRRRAECLVLVSDDSDFVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKAAVSVVGKWKDRDVLKRLEWTYNPELEKEVFGLDDDMGEDEDVEQGSVDENMTNGDSGAWWDLSSDAKTEAVSSRSCK 287
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 7148885 7149748 + Cp4.1LG14g08650.1 Cpe14g00866 481250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00866 287 Pfam NYN domain 113 194 IPR021139 GO:0004540
Cpe14g00866 287 PANTHER - 1 280 - -
Cpe14g00866 287 PANTHER ZINC FINGER (C2H2 TYPE) FAMILY PROTEIN 1 280 - -
Cpe14g00866 287 CDD PIN_LabA-like 54 183 - -
Cpe14g00866 287 ProSiteProfiles Zinc finger C2H2 type domain profile. 42 70 IPR013087 -
Cpe14g00866 287 SUPERFAMILY beta-beta-alpha zinc fingers 41 67 IPR036236 -
Cpe14g00866 287 Gene3D - 2 202 - -
Cpe14g00866 287 MobiDBLite consensus disorder prediction 244 287 - -
Cpe14g00866 287 ProSitePatterns Zinc finger C2H2 type domain signature. 44 65 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00170 Cpe-Chr6:923307 Cpe14g00866 Cpe-Chr14:7148885 5.03E-58 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50548 PF01936 NYN 1.50E-09 CL0280 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00866 - - cmax:111465052 560.836