Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00885 ATGGGAAGCGGAGTCTCCAGCCTCTTCTCGTGCCTTAAGCCGGAGACTCGCCCCGCCGCCCTTCCAGCCGACAATTCCGACCTCCTCTTCTCTGCCACCGAGCCTCTCGACGAAACCCTAGGCCATTCCTTCTGTTACGTCCGCTCTTCCAACCGCTTCCTCTCTCCTTCTCATTCCGATCGCTTTCTTTCCCCTTCTCACTCGCTTCGTTTTTCGCCTCCTCACGAACCGCTGCCTCTCGGGACTAGGACTAGAACTGGCCTGCCGGAGACTGCCTTCAAGGCCATCTCTGGCGCTTCTGTCAGTGCTAATAGTTCTATTCCCAGATCTGTTTTTATGGTCGATAGTGTTTACGACGATGCCACTGACACTGCGCTTGGGGCTTGTGGTAGTGGCTGTGGAGTGAGAGGGAGTATTTTGAATGGCTTTGAGAGTACATCTTCTTTTACTGCTCTTCCGCTTCAGCCGGTGCCCAGAGGTGGGACCGAACCTTTGGAGCGAGGTGGGTTCTTTCTCTCTGGTCCAATTGAGCGTGGGGCACTGTCTGGTCCGCTCGATGCGAATGTTGATGGTGGTGGTGGTGGAGGCGCCGGTGGTGGCGGTGGTGGCAGTGGCGGTGCTGGGAGAGTTCATTTCTCCGCTCCGCTGGGTGGGATGTACGTGAAGAAGAAGAGGAAGAAGAGCATTTCGGGGTTTAGGAAGGCGTTTACGAGGAATTTTTCAGATAAGCGGCCGTGGGTGGTGCCGGTGTTGAATTTCGTTGGCCGAAAGGATAGCTCGACGGCGGGAGATGAGCCGGAGGTGAGGAATGAGAGTGATGTTCAATGGGCGCTTGGGAAGGCTGGGGAGGATCGGGTACATGTGGTTGTATCAGAAGAGCAAGGGTGGTTGTTTGTGGGGATTTATGATGGATTCAATGGCCCTGATGCGCCTGAATTCTTGATGGGTAATCTCTACAGAGCTGTCTTCAATGAGCTTCAGGGATTGTTTTGGGAAATTGATGATAATGAGGAGGCAGCTAATTCAAACCCTTCAAACATTGCTGAAGAGAGTACAATCAGTGTGAATGAAACTAATGCTGACCCCTCTTCCAGAGCCTCTAGTCAAAGGATTGAAACTAATGGAAATGAAGCGGAAGTGGAACCACCGGCTACTGATCGAGGATCGGTCAAGAGGGTTACATTTCAATCCGAGGTTGGATCGGAGAACAGGCGGAGGCGGCAGTTATGGGAGTATTTAGCAGAGGACGATACACAGGATGGACTTGATCTTTCGGGGTCGGAGAGATTTGCATTTTCGGTCGACGATGCGCTTAGTGTAAATAGTGCAGGTTCAGTAGCTGGTAGAAGGTGGCTGTTATTGTCCAAGTTAAAACAAGGGTTGTCAAAGCATAAGGAGGGTAATGTTAAGACTTTGTTCCCATGGAAGTACGGTTTGGGAGATAAGGAGAAGGCTGAGGCTGAGAATAGGGTGGAAGAGACATCTTATCGAAGTGGTAAGAGGAGAAAGGAAGGTTTAATTGATCATGAGTTGGTGTTGGGGGCACTGTCACGAGCTCTTGAGATAACTGAATTAGCATATTTGGATATGACAGATAAGTTGCTTGATACCAATCCAGAGCTTGCTTTGATGGGTTCTTGCTTACTGGTTGTGTTAATGAGGGATGAAGATGTGTATGTAATGAATTTGGGTGATAGCCGTGCCATTGTTGCACAGTATGAGCAGCAAAAAGTTGGCCCTAGTGAAGACATGAAGGAGGAGGGCGACAAAGGGACGGGCATGGAGGGTATAATTGAGGAGTCTACAACGAGCGAAGGGAAAATAACTCGAACGAATCAACCTTCGGCTCAGACGACGAGATTGACTGCATTGCAGCTATCCACCGATCATAGCACGAGCATTGAAGAAAATGAGCACCCGGATGACAAACGGTGCATTGTCAACGATAGAGTGAAGGGTCGTCTAAAGGTTACGAGGGCGTTTGGTGCAGGATTTTTGAAACAGCCAAAATTAAATGATGTCTTACTGGAAATGTTTCGGAATGAGTATATTGGTACGGCGCCATATTTATCATGCTTTCCTTCTCTTCGTCACCATAAACTCTGCCCCACGGATCAATTCATCGTGCTCTCATCTGATGGGTTATATCAATATCTAACCAATGAAGAAGTAGTTTCCTATGTTGAGAACTTCATGGAGAAATTTCCAGATGGAGACCCTGCACAGCACTTGATAGAGGAGCTTCTTTGCCGTGCAGCCAGAAAAGCAGGAATGGACTTTCATGAATTGTTGGACATCCCACAGGGGGATCGGAGAAAGTATCATGATGATGTTACTGTTATGGTCATTTCACTTGAAGGAAGAATCTGGAAATCCTCAGGAAAATATCTTTGA 2394 48.71 MGSGVSSLFSCLKPETRPAALPADNSDLLFSATEPLDETLGHSFCYVRSSNRFLSPSHSDRFLSPSHSLRFSPPHEPLPLGTRTRTGLPETAFKAISGASVSANSSIPRSVFMVDSVYDDATDTALGACGSGCGVRGSILNGFESTSSFTALPLQPVPRGGTEPLERGGFFLSGPIERGALSGPLDANVDGGGGGGAGGGGGGSGGAGRVHFSAPLGGMYVKKKRKKSISGFRKAFTRNFSDKRPWVVPVLNFVGRKDSSTAGDEPEVRNESDVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGNLYRAVFNELQGLFWEIDDNEEAANSNPSNIAEESTISVNETNADPSSRASSQRIETNGNEAEVEPPATDRGSVKRVTFQSEVGSENRRRRQLWEYLAEDDTQDGLDLSGSERFAFSVDDALSVNSAGSVAGRRWLLLSKLKQGLSKHKEGNVKTLFPWKYGLGDKEKAEAENRVEETSYRSGKRRKEGLIDHELVLGALSRALEITELAYLDMTDKLLDTNPELALMGSCLLVVLMRDEDVYVMNLGDSRAIVAQYEQQKVGPSEDMKEEGDKGTGMEGIIEESTTSEGKITRTNQPSAQTTRLTALQLSTDHSTSIEENEHPDDKRCIVNDRVKGRLKVTRAFGAGFLKQPKLNDVLLEMFRNEYIGTAPYLSCFPSLRHHKLCPTDQFIVLSSDGLYQYLTNEEVVSYVENFMEKFPDGDPAQHLIEELLCRAARKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL 797
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 7339290 7347821 - Cp4.1LG14g08860.1 Cpe14g00885 481269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00885 797 Gene3D - 254 792 IPR036457 -
Cpe14g00885 797 MobiDBLite consensus disorder prediction 340 375 - -
Cpe14g00885 797 CDD PP2Cc 503 785 IPR001932 -
Cpe14g00885 797 MobiDBLite consensus disorder prediction 65 85 - -
Cpe14g00885 797 SUPERFAMILY PP2C-like 279 786 IPR036457 -
Cpe14g00885 797 PANTHER PROTEIN PHOSPHATASE 2C 29 21 795 - -
Cpe14g00885 797 MobiDBLite consensus disorder prediction 340 399 - -
Cpe14g00885 797 SMART PP2C_4 267 783 IPR001932 -
Cpe14g00885 797 PANTHER PROTEIN PHOSPHATASE 2C 21 795 IPR015655 GO:0004722|GO:0006470
Cpe14g00885 797 ProSiteProfiles PPM-type phosphatase domain profile. 267 785 IPR001932 -
Cpe14g00885 797 Pfam Protein phosphatase 2C 647 750 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00887 Cpe-Chr10:4986613 Cpe14g00885 Cpe-Chr14:7339290 7.74E-22 dispersed
Cpe14g00885 Cpe-Chr14:7339290 Cpe19g00351 Cpe-Chr19:3077215 2.39E-35 dispersed
Cpe14g00885 Cpe-Chr14:7339290 Cpe05g00920 Cpe-Chr5:6041286 1.29E-172 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00885 - - bhj:120092087 1446.8