Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00928 ATGTATATTGAGAAATTGAAGGAAGAGGAGTTGCAGAGTGGGGAAGAGGGGAATTCAGGTGTTATCGTTAGTAATTTGGAGAGCCAAAGCATTGTTAGGTCTGATGTGAAAAGGATCGTTGTTGGAGTTGGGGCTCGTGTTCTTTTCTACCCAACTTTGCTTTACAATGTTTTCAGAAATAAGCTTCAGACGGAGTTTCGATGGTGGGACAAGGTTGATGAGTTCATATTGTTAGGTGCTGTTCCATTCCCTGCGGATGTTCCCTGTTTGAAGGAGGTTGGCGTTCGAGGAGTGATAACACTAAATGAGCCATATGAGACCTTGGTTCCTTCGACTCTATATCGTGATCATGGAATTGATCATCTGACCATTCCGACTAGAGACTATTGCTTTGCACCTTTATTGAGTGACATTTGTGTTGCTGTAAATTTCATCCACAAAAATGCATCACATGGACAGACTACTTATGTTCATTGTAAAGCTGGACGCGGGCGTAGCACAACCATTGTTATTTGCTATTTGGTGCAATACAAGCAAATGACGCCAGAAGAAGCTTATAAACATGTGAAGTCAATCAGGCCAAGGGTGCTTTTAGCACCATCACAGTGGCAGGCTGTCCTAGAATTCTACCGCCTGATTGTGCAGAAGGATGCTTCCTTCTGCCACATAAATGATTTAGGAAAGAAAGAATCAGAATCAGCGCATGATCTTATTGCATTTGATGATAGTTCTGTAGTTGTTGTAAAAGAATCCGATCTTGATGGATATGACGAAAGTAGCAGCCAAAGTGAAATGGGTGATATCTGGGCAGATTTAAGTGTAGTCTGCAGGGTTCGTGTTGCTGGTCAGGCAGCCCTCACAAGATTCTCTTGTTTGTTGCTCAGCTATCGAGAAAAACACCATAGCCAGGAGATTAAAGGTGATGATCCAGGCGTCAGGAAGGGCTGTTCACTCAGTGCAACTCATTTGGAAGGGTTCAGTGTGGACATTCATGTCTATTAA 1002 42.91 MYIEKLKEEELQSGEEGNSGVIVSNLESQSIVRSDVKRIVVGVGARVLFYPTLLYNVFRNKLQTEFRWWDKVDEFILLGAVPFPADVPCLKEVGVRGVITLNEPYETLVPSTLYRDHGIDHLTIPTRDYCFAPLLSDICVAVNFIHKNASHGQTTYVHCKAGRGRSTTIVICYLVQYKQMTPEEAYKHVKSIRPRVLLAPSQWQAVLEFYRLIVQKDASFCHINDLGKKESESAHDLIAFDDSSVVVVKESDLDGYDESSSQSEMGDIWADLSVVCRVRVAGQAALTRFSCLLLSYREKHHSQEIKGDDPGVRKGCSLSATHLEGFSVDIHVY 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 7805755 7811344 - Cp4.1LG14g09300.1 Cpe14g00928 481312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00928 333 Pfam Dual specificity phosphatase, catalytic domain 88 211 IPR000340 GO:0008138|GO:0016311
Cpe14g00928 333 Gene3D Protein tyrosine phosphatase superfamily 68 218 IPR029021 -
Cpe14g00928 333 ProSitePatterns Tyrosine specific protein phosphatases active site. 157 167 IPR016130 GO:0016311|GO:0016791
Cpe14g00928 333 SMART dsp_5 71 212 IPR020422 GO:0006470|GO:0008138
Cpe14g00928 333 PANTHER - 1 333 - -
Cpe14g00928 333 CDD PTPMT1 68 211 IPR044596 GO:0004721
Cpe14g00928 333 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE DSP8-RELATED 1 333 - -
Cpe14g00928 333 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 62 214 IPR029021 -
Cpe14g00928 333 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 136 204 IPR000387 GO:0016311|GO:0016791
Cpe14g00928 333 ProSiteProfiles Dual specificity protein phosphatase domain profile. 68 215 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g01040 Cpe-Chr7:9344160 Cpe14g00928 Cpe-Chr14:7805755 1.18E-98 dispersed
Cpe11g01158 Cpe-Chr11:9541388 Cpe14g00928 Cpe-Chr14:7805755 5.51E-93 dispersed
Cpe14g00928 Cpe-Chr14:7805755 Cpe17g00126 Cpe-Chr17:803684 1.94E-07 dispersed
Cpe14g00928 Cpe-Chr14:7805755 Cpe08g00726 Cpe-Chr8:5713844 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00928 - - cmax:111465056 652.899