Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00930 ATGATGGCCGGCAACCACGATGGCCTTGGTTTGAGCCTTGGGTTGAGCTTTGATTCTCATCCCCACCGCCATTTGCAGCTCAATCTCATGCCGTCTTGGACTAATGATGCCTCCTCTGATCGGACTTCGGAAACTGGGCGATCGCTGCTACGGGGTATTGATGTGAACCGGATTCCGCCGTCGACGGCGGATTGTGAGGAGGAAGCGGCGATGTCGAGTCCGAATAGTACGGTGTCGAGTGTGAGTGGGAAACGGAGTGAACGGGAAACGAACGGCGAGGATCTCGACGGCGATAGAGATTGTTTCAGAGGAATTAGCGATGAAGAAGACGGCGAAACTTCTAGAAAAAAGCTTCGGCTTACTAAAGATCAGTCCGCCGTCTTGGAAGATAGCTTCAAAGAACACAACACTCTCAATCCTAAGCAAAAGTTGGCTCTGGCGAAACAGTTAGGTCTCCGGCCAAGACAAGTCGAAGTCTGGTTCCAAAACAGAAGGGCAAGGACGAAATTGAAGCAAACGGAGGTTGATTGCGAGTTTCTAAAAAGATGCTGTGAGAATCTGACGGACGAGAATAGACGGTTGCAAAAAGAAGTACAAGAACTGAGAGCACTGAAACTTTCCCCACAATTCTACATGCACATGACCCCACCCACCACCCTTACCATGTGCCCGTCATGCGAGCGTGTCGCGGTCCCACCTTCCACGTCAGCCCCCACTACAGTGACACGAGTGGGCCAAGCCCAAGCCCAAGCTCAGGCCCACCACGCTCGGCCCATCCACATCAACCCGTGGGCCTCCGCCATCCCGGCCCGGCCCTTCAACGCCCTACACCCTCGCTCGTAA 843 53.86 MMAGNHDGLGLSLGLSFDSHPHRHLQLNLMPSWTNDASSDRTSETGRSLLRGIDVNRIPPSTADCEEEAAMSSPNSTVSSVSGKRSERETNGEDLDGDRDCFRGISDEEDGETSRKKLRLTKDQSAVLEDSFKEHNTLNPKQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTDENRRLQKEVQELRALKLSPQFYMHMTPPTTLTMCPSCERVAVPPSTSAPTTVTRVGQAQAQAQAHHARPIHINPWASAIPARPFNALHPRS 280
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 7818059 7819750 - Cp4.1LG14g09290.1 Cpe14g00930 481314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00930 280 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 6 271 - -
Cpe14g00930 280 Pfam Homeobox associated leucine zipper 171 205 IPR003106 GO:0006355|GO:0043565
Cpe14g00930 280 Coils Coil 170 207 - -
Cpe14g00930 280 SMART halz 171 214 IPR003106 GO:0006355|GO:0043565
Cpe14g00930 280 MobiDBLite consensus disorder prediction 32 46 - -
Cpe14g00930 280 MobiDBLite consensus disorder prediction 86 116 - -
Cpe14g00930 280 PRINTS Lambda-repressor HTH signature 142 151 IPR000047 GO:0003677
Cpe14g00930 280 PRINTS Lambda-repressor HTH signature 151 167 IPR000047 GO:0003677
Cpe14g00930 280 Gene3D - 121 167 - -
Cpe14g00930 280 ProSitePatterns 'Homeobox' domain signature. 146 169 IPR017970 GO:0000981|GO:0006355
Cpe14g00930 280 ProSiteProfiles 'Homeobox' domain profile. 111 171 IPR001356 GO:0003677
Cpe14g00930 280 Pfam Homeodomain 115 169 IPR001356 GO:0003677
Cpe14g00930 280 MobiDBLite consensus disorder prediction 68 85 - -
Cpe14g00930 280 SUPERFAMILY Homeodomain-like 106 172 IPR009057 -
Cpe14g00930 280 Pfam HD-ZIP protein N terminus 2 89 IPR006712 GO:0005634
Cpe14g00930 280 MobiDBLite consensus disorder prediction 32 116 - -
Cpe14g00930 280 PANTHER - 6 271 - -
Cpe14g00930 280 CDD homeodomain 115 172 IPR001356 GO:0003677
Cpe14g00930 280 SMART HOX_1 113 175 IPR001356 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01822 Cpe-Chr3:13608181 Cpe14g00930 Cpe-Chr14:7818059 6.47E-103 dispersed
Cpe08g00624 Cpe-Chr8:4126877 Cpe14g00930 Cpe-Chr14:7818059 1.31E-96 dispersed
Cpe10g00508 Cpe-Chr10:2995591 Cpe14g00930 Cpe-Chr14:7818059 1.40E-74 dispersed
Cpe14g00930 Cpe-Chr14:7818059 Cpe19g00701 Cpe-Chr19:5513364 2.60E-73 dispersed
Cpe14g00930 Cpe-Chr14:7818059 Cpe08g00728 Cpe-Chr8:5725956 1.55E-150 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50553 PF04618 HD-ZIP_N 2.80E-21 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00930 K09338 - csv:101223208 435.261