Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00948 ATGAGGGGGATTTCCTTTCATTTTCAGGGGAAGGGGGACTTGGAAATTTCAGCCGCGTTATCTTCTTCTCCGATTTGCTCTGGTTTTGCAGAAAAGTGGGTTAAGAAAGGGGAAGAACACCAAGAACTCGAAGAACAACAACAAGGGTTTTCTTATTTTCTTTTACCCAACAACGAACCCACTTCCGTTCTTCATATGAGAAGCCCCAGTCCTCCCACATCGGTTTCCACTCTCTCTTCTTCCTTTGGCGGTGGCGGTGGCGGTGGCGGTGGTTGTGTTCCTTCACTTCCTCCGGAGACCCCTTCTGTTGAGCCGCTCGCCGGAGCTGGTGTTGGGAACGCCATTTTCTCTAGTGGATTGGAAGATTTGGAGAGTATGTGGTCGGAAACTGCCGGCCCTGAACAGTCGTTTCTCCGATGGATCGCCGGGGATGTTGAAGATTCCACTATCGGGAGTAAAAACCCCTTTGATTTGGATGGCAATGCCGGTATCGGAATTGTCGAACAGGGTTCTGAATTCGGCGGCGGAGCTGGTAATGTTCTTGCTAACATTAATCCTAATTTATCGTTTCCTGTTCCTGCTTGTGGGGGGGCTAATTACAAGAGTTCTAGTTTGGGGATGAACAATCGCCATGGGAATTTGAATCTTCAGAGCCCTATCTTTAATGGGTCTCTTGAAAATCTTGTTGTTCCTGTTTCTGGTTTGATTCAGCCATTTGAGCGCCCTGATGAGAAGCCCCAGAGTTTGAATGCTGCTCAGGTTTTGTTGAACCAGCATCAGCACCCTCAGAATCCTAGCTTCTTTGTGCCATTGATGTTTGGTCAACAAGAACAGCAGCTCCAGCCTCAGCTGAAGAGGCACAATTCGAGCGGAGCACTCGACGCGAACCCGAACGGGTCGATACCGATACCGAATGAGATTTTGATGAGGAATCATCAGGTGCAGGTGTTGCAGCAGCAGCAGCAGCAGCAGCAGCTTGGTTATGCACCTGGTTTGCAGTGTCTTCCTCAGCAGAAGGCAATGTCCCCGAAGCCGAAAGTTGTAGGGCTTGGCGACGAAATGGCGTATAACAATCCCCCACAGCAACAGCAACATGCTTTGCTTGACCAGCTCTACAAGGCGGCGGAGCTGGTCGGGACTGGGAACTTCTCACACGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCACCTGTTGGAAAGCCCCTTCAAAGGGCTGCTTTCTACTTCAAGGAGGCTCTTCAATTGCTCCTCCTTATGAACAACCCGGTTAATCCTCCTCCACCTCGCTGCCCGACACCGTTTGATGTGATCTTCAAGATGGGTGCTTACAAGGTGTTTTCCGAAATCTCCCCACTTGTTCAGTTTGTGAATTTCACCTGCAATCAGGCACTGCTCGAGGCTCTCGACGACGTTGGTCGAATTCACATTGTAGATTTCGATATTGGTTTTGGAGCACAATGGGCTTCTTTTATGCAGGAACTGTCCTTGAGGAACCAGGGTGCATCACTCAAAATCACTGCTTTTGCCTCTCCCTCGACACATCATCCGATTGAACTCGGGCTTATGCGCGAAAATCTCACTCAATTTGCTAATGACATTGGGATAAGTTTCGAGTTCGAAATGATCAACTTCGATTCCTTGAACCAGAACTCCTTTTCGTTGCCATTTTCTCGAGCAAACGAAAACGAGGCTATTGCAGTAAACTTCCCTCTATGTTCGACATCGAATCAACCAGCATTGCTTCCATCTCTCCTCCGTTTCATCAAACAACTCTCACCGAAACTTGTGGTTTCACTCGACCGAGGGTGCGATCGAAGTGACCTCCCATTTCCTCAGCATATGCTTCAGGCACTTCAGTCCTACATTAACCTCCTGGAATCTCTGGATGCTATTAATATGAACTCGGACGCTGTGAACAAGATCGAGAGGTTTCTTTTGCAACCGAGAATTGAAAGCACTGTTCTGGGGCGTCTTCGAGCGCCTGAAAGAATGCCCCTTTGGAAAACACTCTTTGCCTCTGCTGGCTTTACACCAGTAAACTTCAGCAACTTCACTGAAACTCAAGCAGAATGTGTAGCAAAGAGAACTTCTGTGAGGGGATTTCACGTCGAGAAACGCCAGGCTTCCCTAGTTTTATGCTGGCAGCGTCGGGAGCTCATCTCCGCTTCGGCCTGGAGATGTTGA 2190 49.04 MRGISFHFQGKGDLEISAALSSSPICSGFAEKWVKKGEEHQELEEQQQGFSYFLLPNNEPTSVLHMRSPSPPTSVSTLSSSFGGGGGGGGGCVPSLPPETPSVEPLAGAGVGNAIFSSGLEDLESMWSETAGPEQSFLRWIAGDVEDSTIGSKNPFDLDGNAGIGIVEQGSEFGGGAGNVLANINPNLSFPVPACGGANYKSSSLGMNNRHGNLNLQSPIFNGSLENLVVPVSGLIQPFERPDEKPQSLNAAQVLLNQHQHPQNPSFFVPLMFGQQEQQLQPQLKRHNSSGALDANPNGSIPIPNEILMRNHQVQVLQQQQQQQQLGYAPGLQCLPQQKAMSPKPKVVGLGDEMAYNNPPQQQQHALLDQLYKAAELVGTGNFSHAQGILARLNHQLSPVGKPLQRAAFYFKEALQLLLLMNNPVNPPPPRCPTPFDVIFKMGAYKVFSEISPLVQFVNFTCNQALLEALDDVGRIHIVDFDIGFGAQWASFMQELSLRNQGASLKITAFASPSTHHPIELGLMRENLTQFANDIGISFEFEMINFDSLNQNSFSLPFSRANENEAIAVNFPLCSTSNQPALLPSLLRFIKQLSPKLVVSLDRGCDRSDLPFPQHMLQALQSYINLLESLDAINMNSDAVNKIERFLLQPRIESTVLGRLRAPERMPLWKTLFASAGFTPVNFSNFTETQAECVAKRTSVRGFHVEKRQASLVLCWQRRELISASAWRC 729
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 7988889 7991078 - Cp4.1LG14g09530.1 Cpe14g00948 481332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00948 729 Pfam GRAS domain family 368 728 IPR005202 -
Cpe14g00948 729 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 36 728 IPR005202 -
Cpe14g00948 729 ProSiteProfiles GRAS family profile. 358 728 IPR005202 -
Cpe14g00948 729 MobiDBLite consensus disorder prediction 65 83 - -
Cpe14g00948 729 PANTHER SCARECROW-LIKE PROTEIN 6 36 728 - -
Cpe14g00948 729 MobiDBLite consensus disorder prediction 65 100 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe08g00744 Cpe14g00948 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe12g00413 Cpe-Chr12:3038749 Cpe14g00948 Cpe-Chr14:7988889 6.49E-156 dispersed
Cpe14g00553 Cpe-Chr14:3510614 Cpe14g00948 Cpe-Chr14:7988889 1.35E-68 dispersed
Cpe14g00948 Cpe-Chr14:7988889 Cpe17g00396 Cpe-Chr17:2917333 2.33E-155 dispersed
Cpe14g00948 Cpe-Chr14:7988889 Cpe08g00744 Cpe-Chr8:5898341 2.72E-94 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50556 PF03514 GRAS 8.10E-92 CL0063 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00948 - - csv:101218630 1167.53