Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00955 ATGGCTGGATTGGATTTAGGAAGCCGATATCTAAATCACCTTCAAACGGGTGTAGATGATCCACTAAATCGCGGTGGTCATTTCTCCTCCGGCGACCACGACGACGACGACGACCCCCACCAAACCCTAGGTGGTCCGGGAGATGTGGTTGGCCGCCGCCCACGCGGCCGGCCACCAGGTTCCAAAAACAAGCCAAAGCCGCCAGTAATCATCACTCGAGAGAGCGCCAACACACTACGTGTCCACATCTTAGAGGTTGGCAGCGGCTGCGACATCTTTGATTGCATCGCCGCCTATGCTCGCCGGCGGCAGCGTGGGATCTGTATTTTGAGCGGCAGTGGAAACGTCACCAACGTCGGCCTCCGTCAGCCAGCGTCGGCAGGGGCGGTACTAACACTTCAAGGGAGGTTTGAGATTTTATCACTCTCCGGATCGTTTCTTCCGCCGCCTGCTCCACCGGGTGCCACTAGTTTGACAATATTTCTCGCCGGAGGACAAGGGCAAGTGGTGGGAGGGACGGTGGCCGGAGAATTAACGGCGGCAGGGCCAGTGATTTTGATTGCAGCTTCTTTTACTAATGTGGCGTATGAAAGATTACCACTTGATGAGGAGGATCAGCAGCAAGCTCCGACAGGCAGCGGCGGAGGTGGCGGCGGCAGCGGCGGCGGAGTGGGTAACAACAACAACAACAACAACCCATTTCAAGACCCATCAAATTCAGGCCTTCCATTCTTGAATTTGCCACTTCATATGCAAAATGTTCAACTTCCACCCTTTTGA 780 55.13 MAGLDLGSRYLNHLQTGVDDPLNRGGHFSSGDHDDDDDPHQTLGGPGDVVGRRPRGRPPGSKNKPKPPVIITRESANTLRVHILEVGSGCDIFDCIAAYARRRQRGICILSGSGNVTNVGLRQPASAGAVLTLQGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGTVAGELTAAGPVILIAASFTNVAYERLPLDEEDQQQAPTGSGGGGGGSGGGVGNNNNNNNPFQDPSNSGLPFLNLPLHMQNVQLPPF 259
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8063080 8063859 + Cp4.1LG14g09550.1 Cpe14g00955 481339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00955 259 MobiDBLite consensus disorder prediction 15 70 - -
Cpe14g00955 259 Pfam Plants and Prokaryotes Conserved (PCC) domain 80 193 IPR005175 -
Cpe14g00955 259 MobiDBLite consensus disorder prediction 26 42 - -
Cpe14g00955 259 CDD DUF296 80 191 IPR005175 -
Cpe14g00955 259 Gene3D - 79 208 - -
Cpe14g00955 259 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 23 40 258 - -
Cpe14g00955 259 ProSiteProfiles PPC domain profile profile. 76 213 IPR005175 -
Cpe14g00955 259 MobiDBLite consensus disorder prediction 205 244 - -
Cpe14g00955 259 MobiDBLite consensus disorder prediction 222 244 - -
Cpe14g00955 259 SUPERFAMILY AF0104/ALDC/Ptd012-like 76 207 - -
Cpe14g00955 259 PIRSF ESCAROLA 8 256 IPR014476 GO:0003680
Cpe14g00955 259 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 40 258 IPR014476 GO:0003680
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe14g00955 Cpe15g00220 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe14g00955 Cpe-Chr14:8063080 Cpe17g00291 Cpe-Chr17:1974212 1.32E-81 dispersed
Cpe14g00955 Cpe-Chr14:8063080 Cpe15g00220 Cpe-Chr15:1903902 1.93E-92 wgd
Cpe14g00955 Cpe-Chr14:8063080 Cpe05g00183 Cpe-Chr5:963252 1.02E-91 wgd
Cpe14g00955 Cpe-Chr14:8063080 Cpe08g00854 Cpe-Chr8:6759896 7.91E-116 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00955 - - csv:101210132 374.015