Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g00973 ATGGTTTCGAGGTCTTATTCTAACTTGTTAGAGCTTGCTTCTGGTGGTTGTTCTCCTACTTTTGGCCTTGGCCGAGAGAAGAAGAGGCTTCCTAGAGTGGCTACTGTGGCTGGAGTCTTGTCTGAACTTGATGATGATAGCTGCAACAGCACTGGTTCGGATGCCCTTTCGTCGGTATCGCAAGACCGTATGATCGTTGTTGGGAATCAGCTCCCGATTCGAGCACATCGAGACGAGAATGGAGAATGGGAGTTTAGTATGGATGAAGATTCACTTCTTTTACAGCTTAAAGATGGACTTGGAGAAGATGTGGAAGTGATTTATATTGGTTGTCTTAGAGAAGAGGTTGATCCAAGAGAGCAAGATGATGTTGCACAAACTCTTTTGGATCGATTCAAGTGTGTCCCGACGTTCCTTCCTCCCGAGCTTTTTAGTAAATTTTATCATGGATTCTGCAAGCAACATTTATGGCCATTGTTTCACTATATGCTTCCCTTGTCACCGGACCTTGGTGGTCGATTCGATAGGTCGCTTTGGCAAGCGTATCTTTCGGTGAATAAGATATTTGCAGATAAAGTTATGGAAGTGATTAGTCCTGATGATGACTTTGTTTGGGTTCATGATTACCATTTGATGGTTTTGCCAACATTTTTGAGGAAGAGGTTTAACAGGGCGAAGCTCGGATTCTTCCTACATAGTCCATTTCCTTCGTCCGAGATTTACCGAACCCTTCCCGTAAGAGATGAACTTCTTCGAGCACTATTGAACTCTGATCTCATTGGCTTCCACACGTTTGATTATGCTAGGCACTTTTTATCTTGCTGTAGCCGAATGCTCGGTTTGTCTTATCAATCTAAGCGAGGCTACATTGGGCTTGAATACTACGGTCGTACGGTGAGTATTAAGATTCTTCCTGTCGGTATTCATATCGGTCAGCTACAAAATGTATTGAATCTGCCTGAGACAGTATCCAAAGTTGCTGAATTGCAAGAGCGGTTCAAGGGTCAAACTGTTTTGCTCGGGGTCGATGATATGGACATATTTAAAGGGATCAGCTTGAAACTTTTGGCGTTCGAACAATTGCTCCGACAACATCCCGAGAGATGGGGTAAAGCTGTGTTGGTACAGATTGCGAACCCTGCACGAGGCAGAGGGAAAGATGTACAGGAGGTTATGGCTGAAACTACTGCAACGGTGGATAGAATTAATGCAACATTCAGAAGGCCAGGATATGAGCCTGTGGTTTTGATCAACACTCCCTTGCAGTTTTACGAGCGAAACGCTTATTATGCAATTGCTGAATGCTGCCTTGTTACAGCGGTGAGAGACGGGATGAATCTTATACCTTACGAGTATATTATATGTCGACAAGGCAACGAAGAACTCGACAATGTTCTCGGGCTAAATCCTTCAACTCCAAAGAAGAGCATGCTCGTGTTGTCTGAGTTTATTGGGTGTTCTCCGTCACTCAGTGGTGCTATTCGTGTTAATCCTTGGAATATTGAAGCTGTCACCGAAGCGATGGACTCTGCCCTGGTAATCCCGGAGGCCGAAAAGCAACTGCGACATGAAAAGCATTATAGGTATGTTAGTACGCACGATGTTGCGTATTGGGCACGAAGCTTTTTGCAGGATTTGGGCAGGGCTTGCAGAGACCATTCAATGAGGAGGTGCTGGGGCATAGGTTTCGGTTTAGGATTTCGAGTTATTGCCCTGGATCCGAATTTCAGGAAGCTTTCGGTTGATCATATCGTTTCGGTGTATAAACGAACCTGTCACCGAGCAATTTTGTTAGATTATGATGGTATCATGATGCTTCCTGGATCGATTAGTATGAATCCAACTTCAGAAGCCCTTGGAATCCTGAACAACCTGTGTAAAGATCCTAAAAATGTCGTGTTCCTCGTTAGCGGAAAGGATCGAAAAACTCTGACCGAATGGTTTTCACAGTGCGAAAAACTTGGATTAGCTGCAGAACATGGTTTTTATCTTAGGCCAAATCATACAGCAGATTGGGAGACGTGTGTAGGTGTGACGGATTTCGACTGGAAACAGATTGCAGAACCCGTTATGCAATTGTATACCGAGACAACCGATGGCTCGACAATCGAAACTAAAGAGAGTGCGCTTGTTTGGAACTACCTTTACGCGGATCCTGATTTCGGGTCGTGCCAGGCCAAGGAACTTTTAGATCACCTGGAAAGTGTTCTTGCCAATGAGCCAGTTTCTGTCAAGAGTGGGCAACACATTGTAGAAGTCAAACCTCAGGGTGTAAACAAGGGCATTGTAGCAGAACATCTCTTGCAAACAATGAAGGAGAAAGGAATGCTTCCCGATTTCGTTCTATGCATCGGAGACGACAGGTCGGACGAGGATATGTTCGAGGTGATAACAAGTGCAAAAGCCACCCTTCCTCCCGGTGCCGAAGTGTTCGGTTGCACCGTTGGCCAGAAACCGAGCAAGGCCAAGTACTACTTAGAAGACACACACGAAATCTTGAGAATGTTACAAGGTCTCACCCATGCGTCCGAGCATGCCGCTAGAGCTGCTCCGCAGATGACGACGATGACGACGACAACGACAACGACGCCTCACAGAGTGGTAATTTCAGAGAGTAAATAA 2622 45.35 MVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDSCNSTGSDALSSVSQDRMIVVGNQLPIRAHRDENGEWEFSMDEDSLLLQLKDGLGEDVEVIYIGCLREEVDPREQDDVAQTLLDRFKCVPTFLPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYLSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRAKLGFFLHSPFPSSEIYRTLPVRDELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYQSKRGYIGLEYYGRTVSIKILPVGIHIGQLQNVLNLPETVSKVAELQERFKGQTVLLGVDDMDIFKGISLKLLAFEQLLRQHPERWGKAVLVQIANPARGRGKDVQEVMAETTATVDRINATFRRPGYEPVVLINTPLQFYERNAYYAIAECCLVTAVRDGMNLIPYEYIICRQGNEELDNVLGLNPSTPKKSMLVLSEFIGCSPSLSGAIRVNPWNIEAVTEAMDSALVIPEAEKQLRHEKHYRYVSTHDVAYWARSFLQDLGRACRDHSMRRCWGIGFGLGFRVIALDPNFRKLSVDHIVSVYKRTCHRAILLDYDGIMMLPGSISMNPTSEALGILNNLCKDPKNVVFLVSGKDRKTLTEWFSQCEKLGLAAEHGFYLRPNHTADWETCVGVTDFDWKQIAEPVMQLYTETTDGSTIETKESALVWNYLYADPDFGSCQAKELLDHLESVLANEPVSVKSGQHIVEVKPQGVNKGIVAEHLLQTMKEKGMLPDFVLCIGDDRSDEDMFEVITSAKATLPPGAEVFGCTVGQKPSKAKYYLEDTHEILRMLQGLTHASEHAARAAPQMTTMTTTTTTTPHRVVISESK 873
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8231859 8236874 - Cp4.1LG14g09680.1 Cpe14g00973 481357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g00973 873 CDD HAD_TPP 595 831 - -
Cpe14g00973 873 Pfam Trehalose-phosphatase 597 829 IPR003337 GO:0003824|GO:0005992
Cpe14g00973 873 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 596 797 IPR006379 -
Cpe14g00973 873 Gene3D - 723 853 IPR023214 -
Cpe14g00973 873 Gene3D - 593 710 IPR023214 -
Cpe14g00973 873 Pfam Glycosyltransferase family 20 63 546 IPR001830 GO:0003824|GO:0005992
Cpe14g00973 873 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 846 IPR001830 GO:0003824|GO:0005992
Cpe14g00973 873 TIGRFAM T6PP: trehalose-phosphatase 593 840 IPR003337 GO:0003824|GO:0005992
Cpe14g00973 873 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6 1 846 - -
Cpe14g00973 873 SUPERFAMILY HAD-like 594 839 IPR036412 -
Cpe14g00973 873 CDD GT20_TPS 63 546 IPR001830 GO:0003824|GO:0005992
Cpe14g00973 873 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 63 550 - -
Cpe14g00973 873 Gene3D Glycogen Phosphorylase B; 315 531 - -
Cpe14g00973 873 Gene3D Glycogen Phosphorylase B; 55 314 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g00861 Cpe-Chr8:6802020 Cpe14g00973 Cpe-Chr14:8231859 0 dispersed
Cpe10g00131 Cpe-Chr10:838756 Cpe14g00973 Cpe-Chr14:8231859 0 dispersed
Cpe14g00973 Cpe-Chr14:8231859 Cpe15g00820 Cpe-Chr15:8155545 0 dispersed
Cpe14g00973 Cpe-Chr14:8231859 Cpe01g00950 Cpe-Chr1:5627484 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g00973 K16055 - csv:101207192 1688.32