Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g01000 ATGTTTACATGCATAGCATGTACGAAACAGACAGACGACGGGGGTGAGGATGGGGCTGCGCGTGGTAGTGGCACGCCTAGTACAAAGGAAGCCGTCAAAAGCCTGACAACACAGATTAAGGACATGGCGTTGAAATTCTCCGGTGCTTACAGACAGTGCAAACCCTGCACAGGCTCCAGTAGCTATAAGAAAGGACAGCGACCTTACCCAGATTTTGACACTGCTTCAGAAGGGGTTCCATACCCCTACATAGGAGGGGCAAGTGCAAGCTCAACCCCTGCCTGGGACTTCCCTCGTGTTAATCGCCACCCACATACCAGATCTGACTCTAGATTTAAAGGGGTCTTCCGAGGAGATCAGACTCCTGGAGCCGATTCCTCCATATCAGCATGTGATGTGGTGCTCGAGGATGAGGATGAGTCGAAAGAGTGGATGGCACAGGTGGAGCCTGGTGTTCACATCACTTTTGTGTCCCTACCCAATGGAGGCAATGATTTAAAACGAATTCGTTTCAATCGAGAAATGTTTAACAAATGGCAAGCTCAGCGTTGGTGGGGCGAGAACTATGACAGAATAACGGAGCTCTATAATGTCCAGAGATTCAACCAGCAAGCTCTTCATACGCCACCAAGAACTGAGGACGGGAGGGATTCTTCTTACTCAAAGATGGGAAGGGATAGTCCGATGACTTCAGGGAACAAAGATTGGACGCCAAGAAACTACAAACCTTCTGGGAGTAAAGGATTTCCATCTGACCAGCATTTTGACCAAGGAAGCAGCCACCATTATGCAGGTTCAAGTGCCTATCCAGCAGGTAGCGCGAAAGGCGACATGTCGTCTATGGAAGCATCACGCACAACTACCTCTTCTAGAGACGAACCTTCAATTTCCATTAGCAATGCAAGCGACATCGAGGCGGAGTGGGTCGAGGAAGATGATCCCGGGGTCTATATAACTATCAGGCAGCTTGTTGATGGCACTAGAGAGCTTCGTCGTGTCAGATTCAGCCGTGAAAAGTTCGGGGAAATGAACGCGAAGCAATGGTGGGATGAGAACAGGGAGAGGATCCAAGCTCAATACCTTTAA 1086 49.36 MFTCIACTKQTDDGGEDGAARGSGTPSTKEAVKSLTTQIKDMALKFSGAYRQCKPCTGSSSYKKGQRPYPDFDTASEGVPYPYIGGASASSTPAWDFPRVNRHPHTRSDSRFKGVFRGDQTPGADSSISACDVVLEDEDESKEWMAQVEPGVHITFVSLPNGGNDLKRIRFNREMFNKWQAQRWWGENYDRITELYNVQRFNQQALHTPPRTEDGRDSSYSKMGRDSPMTSGNKDWTPRNYKPSGSKGFPSDQHFDQGSSHHYAGSSAYPAGSAKGDMSSMEASRTTTSSRDEPSISISNASDIEAEWVEEDDPGVYITIRQLVDGTRELRRVRFSREKFGEMNAKQWWDENRERIQAQYL 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8438601 8444368 + Cp4.1LG14g09910.1 Cpe14g01000 481384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g01000 361 MobiDBLite consensus disorder prediction 203 299 - -
Cpe14g01000 361 Pfam Transcription factor BRX N-terminal domain 23 56 IPR027988 -
Cpe14g01000 361 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 361 IPR044532 -
Cpe14g01000 361 MobiDBLite consensus disorder prediction 11 30 - -
Cpe14g01000 361 MobiDBLite consensus disorder prediction 223 266 - -
Cpe14g01000 361 ProSiteProfiles BRX domain profile. 306 361 IPR013591 -
Cpe14g01000 361 PANTHER BREVIS RADIX-LIKE PROTEIN-RELATED 1 361 - -
Cpe14g01000 361 ProSiteProfiles BRX domain profile. 142 197 IPR013591 -
Cpe14g01000 361 MobiDBLite consensus disorder prediction 279 299 - -
Cpe14g01000 361 Pfam Transcription factor regulating root and shoot growth via Pin3 305 360 IPR013591 -
Cpe14g01000 361 Pfam Transcription factor regulating root and shoot growth via Pin3 142 196 IPR013591 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe12g00595 Cpe-Chr12:5952140 Cpe14g01000 Cpe-Chr14:8438601 1.15E-104 dispersed
Cpe14g01000 Cpe-Chr14:8438601 Cpe17g00467 Cpe-Chr17:3481829 3.26E-113 dispersed
Cpe14g01000 Cpe-Chr14:8438601 Cpe08g00897 Cpe-Chr8:7081373 6.82E-10 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g01000 - - csv:101210860 716.457