Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g01026 ATGGCTGCTTCCATTTCTCCTCCTCTTCTTCCCTTCTTCCTCTTCTTCTTCTCTTGTGTACATTCAGCTACTTTCACCATTTTAAACCAATGTGGTTACCCAATTTGGCCCGGAGTCTTGTCGGGCGCTGGCACGTCACAACTTTCAACCACCGGTTTCGTCCTGCAGCCAGGACAGTCCAACGCCCTCACCATGCCTCCGTCGTGGTCTGGCCGGATTTGGGGTCGCACTTATTGCTCCCAAGACAATGCTGGTAGATTCTCCTGTGCCACTGCTGACTGCGGCTCAGGCACCGTCGAATGCAACGGTAGTGGCGCTGCCCCGCCCGCTACCCTCGCTGAGTTCACGCTCAATGGTGCTGGTGGACTTGATTTCTATGATGTTAGCCTCGTCGATGGCTATAACGTACCCATGTTAATCACTCCACAAGCTAGCTCAAGCGGAGGTAATTGCACGACGATCGGGTGTGCAGCAAATTTAAACACGGAGTGTCCAATGGAGCTAAGAGTGGCAGTGGATGGGCAGAGCGTGGCGTGCAAGAGCGCATGTGGGGCATTTGGTGAGCCGCAATATTGCTGCAATGGCGAATATGGGAGCCCAAGCACTTGTCGACCCACGTCTTACTCAGAGTACTTCAAGTCGGCATGTCCGCAAGCTTATAGTTATGCCTATGATGATGGAACCAGCACCTTCACTTGCGCCGCCGCCAATTACCTCATCACGTTCTGTCCTTCTCTTTCAACTAGGTAA 750 52.93 MAASISPPLLPFFLFFFSCVHSATFTILNQCGYPIWPGVLSGAGTSQLSTTGFVLQPGQSNALTMPPSWSGRIWGRTYCSQDNAGRFSCATADCGSGTVECNGSGAAPPATLAEFTLNGAGGLDFYDVSLVDGYNVPMLITPQASSSGGNCTTIGCAANLNTECPMELRVAVDGQSVACKSACGAFGEPQYCCNGEYGSPSTCRPTSYSEYFKSACPQAYSYAYDDGTSTFTCAAANYLITFCPSLSTR 249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8632746 8633575 + Cp4.1LG14g10170.1 Cpe14g01026 481410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g01026 249 PRINTS Pathogenesis-related protein signature 24 36 IPR001938 -
Cpe14g01026 249 PRINTS Pathogenesis-related protein signature 234 243 IPR001938 -
Cpe14g01026 249 PRINTS Pathogenesis-related protein signature 72 83 IPR001938 -
Cpe14g01026 249 PRINTS Pathogenesis-related protein signature 124 140 IPR001938 -
Cpe14g01026 249 SMART tha2 25 244 IPR001938 -
Cpe14g01026 249 Pfam Thaumatin family 29 244 IPR001938 -
Cpe14g01026 249 ProSitePatterns Thaumatin family signature. 85 101 IPR017949 -
Cpe14g01026 249 SUPERFAMILY Osmotin, thaumatin-like protein 23 245 IPR037176 -
Cpe14g01026 249 PIRSF PR5 2 249 IPR001938 -
Cpe14g01026 249 PANTHER - 18 245 - -
Cpe14g01026 249 PANTHER OS03G0233200 PROTEIN 18 245 IPR001938 -
Cpe14g01026 249 Gene3D Thaumatin 23 244 IPR037176 -
Cpe14g01026 249 ProSiteProfiles Thaumatin family profile. 22 244 IPR001938 -
Cpe14g01026 249 CDD TLP-PA 24 243 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00061 Cpe-Chr6:313847 Cpe14g01026 Cpe-Chr14:8632746 4.04E-108 dispersed
Cpe08g01073 Cpe-Chr8:8161158 Cpe14g01026 Cpe-Chr14:8632746 7.06E-41 dispersed
Cpe11g00260 Cpe-Chr11:1408672 Cpe14g01026 Cpe-Chr14:8632746 2.41E-102 dispersed
Cpe14g01026 Cpe-Chr14:8632746 Cpe16g00306 Cpe-Chr16:4963336 9.08E-103 dispersed
Cpe19g00439 Cpe-Chr19:3913364 Cpe14g01026 Cpe-Chr14:8632746 3.12E-87 dispersed
Cpe10g00668 Cpe-Chr10:3853700 Cpe14g01026 Cpe-Chr14:8632746 2.82E-92 wgd
Cpe14g01026 Cpe-Chr14:8632746 Cpe19g00864 Cpe-Chr19:6375834 3.89E-89 wgd
Cpe14g01026 Cpe-Chr14:8632746 Cpe02g00066 Cpe-Chr2:340568 1.28E-106 wgd
Cpe14g01026 Cpe-Chr14:8632746 Cpe08g00923 Cpe-Chr8:7261778 4.95E-91 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g01026 - - csv:101216818 424.476