Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g01030 ATGTCCACTCCATTGCGGAAGGTGTTCTGTAGAATTTCAGGCCTTGCAACTTCTCTGAGAAGAAACACAGCCCCTCACAGCAGAAGAATCTTTCACAGAGATGTTGAACAACAAGAGTTTCAATATGCAAGCTCTCATTGCCTTTCTTCTTATTACAGTGTCTTTGTTGCTCGCCTTGCTATAATGGTGATGCTGGCTATTTTGATTGGGATGCTGACAATACTCACATGGCACTTCACGAAGAGCTACACGGCACAGTCGCTCGATAGCTTAGCGTATGGTCTTCGACATGAACTGCTGCAGCGCCCGATCTTACGGATGTGGAGTGTCTTGAATTCCACAGCTGAAATAACCACAGCTCAGGTTAAGCTTTCAGAATATGTAATGAGGAAGTACAGCAAGCCAAATGGTTTTGTCCAAGCGTTCCATCGAGATCATAGAAGCAACAATACGTTTTATATTTACTCGGATCTTGCAAACTATTCCATCACTGCCACTCAATCATATAATATAAATCGACTTTCGTCGGGTGAAGGGTGGTCCGAACCACCCATACATGGCAATGTTTCAGCAAAATGGTACCGGGAACCGCTTGATCCTATCAGTGGTGAGAAGATGGGGAAAGCAAGGCAAATCCCACCGGAGGACTTGATTAACATTCCTGGCATTTCACAGGTAGCTGATGGTGTTGCCTCATGGCATGTTACTGTCAGCAAGTACATGGATACACCATTGCTTTCAGCAGCCCTTCCTGTTTCGGATGCTTCAAATGAAAGCATAGTTGCGGTGGTCGGTGTCACGACCGCACTTTCGAGCGTCGGTCAACTTATGAAGGAGCTTGTTGAGTTCCATAGTGGACATATTTATCTAACCTCTCAAGAGGGCTACTTGCTTGCTACTTCAGCCAATGCTCCCTTGTTAAGAAATACATCGACTGGTCCGAAGCTTATGATGGCTGTCGATTCCCAAGATGACGTGATTCGATTAGGAGCCGAATGGTTAAACAAAACCTATGGAAACAACTTTCCTCCTGGTCATGAGGTCCATGAAGAGAATGTCAAGCTTGGTGGTCAGCAGTATTACATCGACTCGTTTTTTCTTAATCTAAAGAAGCTTCCCATTGTGGGGGTTGTCATCATTCCTAGGCAATACATAATGGGAAAGGTAGATGAAAGAGCTTACAAAACATTGGTTATACTCATTTCTGCCTCTTTGTGCATCTTAGTTGTTGGATGTCTATTCATTTTGATTCTGACAAAAGGAGTATCTAAGGAAATGAAACTAAGAGCTGAACTAATAAGCCATCTTGATGCAAGAAGAAGAGCAGAGGCATCTAGTAATTACAAGAGTCAATTTCTCGCGAATATGAGTCATGAGCTGAGGACACCGATGGCTGCCGTAATTGGACTGCTCGACATTCTAATGTGCGATGACTGTCTCAATAACGAACAGTTTGCGACAGTCACTCAGATTCGAAAATGCTCGACAGCTCTACTCCGACTTCTTAACAACATTCTAGATCTAAGCAAGGTTGAATCTGGAAAGCTAGTTTTGGAAGATGCGGAGTTTGATCTGGGACGAGAACTCGAAGGGCTTGTTGATATGTTTTCCGTGCAATGCATCGACCATAATGTGGAAACTGTATTGGATCTCTCTGATGATATGCCGAGATTAGTTCGAGGAGACTCCGGTCGGGTTGTTCAAATATTCACAAACTTGATTAGCAACTCTATCAAATTCACTACTACTGGTCACATCATTCTTCGAGGGTGGTGCGAGACGTCGAATACGCTCAAAGAAATGGGAAAGTCTTGTATGGATCAGAAGAAATCACGGTTTCCTAATCGGACAAAGATGAAACAACACGGAGACCACACGAAGAACGCGTTCAAGAAAGATAACAAAATGACCTTATGGTTTGAACTTGATGACACTGGCTGTGGGATCGATCCTAGCAAATGGGAGTCTGTTTTTGAAAGCTTTGAGCAAGCAGATCCCTCGACAACCCGAACGCACGGTGGCACTGGTCTTGGACTATGCATCGTACGTACCTTGGTTAACAAGATGGGTGGTGAAATCAAGGTCGTAAAGAAAAACGGCCCGGGAACTCTAATGCGACTTTATTTGGTTCTCAGCACACCTGTAGACTCCATAGATCATCACTCTCAGTTTGATTTTGCAAAACATAATGCAGTGGTACTTCTTGCACTCCGTGGCAGCACGAGTCGATTAATCACGTCGCAGTGGCTTCGTAAGATCGGACTGTTCACTTTAGAGGCTTCAGAATGGAATGAACTAACTCTAATCCTTCAAGAACTCTTTCAAGCCAGAAAGTTCGAAAACAAAAAGGGATTTAGTCCACAGGATTCCCTCGGTGAACCATTACGAGCCGAGTTAACGAGAATTAAGGACATGAAAAGCCAAACGTTCATCGTCGTTGCCGATATCGGGATACTGGACTTGAGCACGGATATTTGGAAGGATCAACTTTACTTCCTTGACAAGTACTCTGGAAAAGTGAAGTTTGCGTGGATGTTAAACCACGATACGTCCAACGCCATGAAGACGGAGCTTCGGGGAAAAGGACACTTTATAGTGAACAATAAGCCGCTGTATAGAGCAAAAATGATTCATATTTTGGAAGCTGTTATGAAGGACAGAAATCTTGAGATTCAGAGGAAAAATGGTTTAAGAAATGCATCAAAAGAAGGGGATTATCATGAATGCCTTGAAATTGATTCAACTCAGTTTGAAACTGCTAGCTCAGATGATTCTGATTTAGCTGAACTTGACAAGTCCAAGTCTCAGTGTGCAACATTTCAGGAAGAAACAATGCCAAAACCTTGTCAGCCGCCATTTTCGTCCCTTAACGATAGCTTAGTTGAGTTAACTCGTGTACGTTCGACTGTGAGTAACGCAGGGACCGGCGGTTCATGTGACATGAGACAAGACTCGTCCCATGGACTGAACTTAGGAGGCAACTATCCTAAAAGCCAAGAAGAATCAGATTCTAAGAATGGTCATGGTAAGAAATCTCTTGAAGGGCTACGCATTTTGCTTGCAGAAGATACACCGGTTCTTCAAAGAGTAACGACGATAATGCTCGAAAGAATGGGAGCCACGGTGATCGCTGTCGGAGATGGGCTGCTGGCTGTTGAAGCTCTGACTGCAATGCTTAGTGCTGAAGAGCAAAGAAGAGAATGCCCCACAAGATATGATTTGGTCTTGATGGATTGCCAAATGCCAAAGATGGACGGCTACGAAGCAACAAAAGCGATTAGAAAGCTAGAATTGGGAACGAGCCTTCACGTACCGATCGTAGCATTGACAGCCCACGCAATGTCATCGGATGAAGCCAAATGCTTGGAAGTAGGAATGGATGCATACCTAACAAAGCCAATTGACTATAAGCTGATGGTATCCACCATACTTTCCCTCACTCGGAGAAAAGTCTAA 3456 43.92 MSTPLRKVFCRISGLATSLRRNTAPHSRRIFHRDVEQQEFQYASSHCLSSYYSVFVARLAIMVMLAILIGMLTILTWHFTKSYTAQSLDSLAYGLRHELLQRPILRMWSVLNSTAEITTAQVKLSEYVMRKYSKPNGFVQAFHRDHRSNNTFYIYSDLANYSITATQSYNINRLSSGEGWSEPPIHGNVSAKWYREPLDPISGEKMGKARQIPPEDLINIPGISQVADGVASWHVTVSKYMDTPLLSAALPVSDASNESIVAVVGVTTALSSVGQLMKELVEFHSGHIYLTSQEGYLLATSANAPLLRNTSTGPKLMMAVDSQDDVIRLGAEWLNKTYGNNFPPGHEVHEENVKLGGQQYYIDSFFLNLKKLPIVGVVIIPRQYIMGKVDERAYKTLVILISASLCILVVGCLFILILTKGVSKEMKLRAELISHLDARRRAEASSNYKSQFLANMSHELRTPMAAVIGLLDILMCDDCLNNEQFATVTQIRKCSTALLRLLNNILDLSKVESGKLVLEDAEFDLGRELEGLVDMFSVQCIDHNVETVLDLSDDMPRLVRGDSGRVVQIFTNLISNSIKFTTTGHIILRGWCETSNTLKEMGKSCMDQKKSRFPNRTKMKQHGDHTKNAFKKDNKMTLWFELDDTGCGIDPSKWESVFESFEQADPSTTRTHGGTGLGLCIVRTLVNKMGGEIKVVKKNGPGTLMRLYLVLSTPVDSIDHHSQFDFAKHNAVVLLALRGSTSRLITSQWLRKIGLFTLEASEWNELTLILQELFQARKFENKKGFSPQDSLGEPLRAELTRIKDMKSQTFIVVADIGILDLSTDIWKDQLYFLDKYSGKVKFAWMLNHDTSNAMKTELRGKGHFIVNNKPLYRAKMIHILEAVMKDRNLEIQRKNGLRNASKEGDYHECLEIDSTQFETASSDDSDLAELDKSKSQCATFQEETMPKPCQPPFSSLNDSLVELTRVRSTVSNAGTGGSCDMRQDSSHGLNLGGNYPKSQEESDSKNGHGKKSLEGLRILLAEDTPVLQRVTTIMLERMGATVIAVGDGLLAVEALTAMLSAEEQRRECPTRYDLVLMDCQMPKMDGYEATKAIRKLELGTSLHVPIVALTAHAMSSDEAKCLEVGMDAYLTKPIDYKLMVSTILSLTRRKV 1151
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8659658 8667294 + Cp4.1LG14g10340.1 Cpe14g01030 481414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g01030 1151 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 561 711 IPR003594 -
Cpe14g01030 1151 PANTHER TWO-COMPONENT HISTIDINE KINASE 136 1148 - -
Cpe14g01030 1151 PANTHER TWO-COMPONENT HISTIDINE KINASE 1 133 - -
Cpe14g01030 1151 SUPERFAMILY CheY-like 1014 1149 IPR011006 -
Cpe14g01030 1151 Gene3D - 994 1149 - -
Cpe14g01030 1151 PRINTS Bacterial sensor protein C-terminal signature 638 652 IPR004358 GO:0016310|GO:0016772
Cpe14g01030 1151 PRINTS Bacterial sensor protein C-terminal signature 673 691 IPR004358 GO:0016310|GO:0016772
Cpe14g01030 1151 PRINTS Bacterial sensor protein C-terminal signature 656 666 IPR004358 GO:0016310|GO:0016772
Cpe14g01030 1151 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 503 709 IPR036890 -
Cpe14g01030 1151 SMART REC_2 1016 1143 IPR001789 GO:0000160
Cpe14g01030 1151 CDD REC_hyHK_CKI1_RcsC-like 1018 1143 - -
Cpe14g01030 1151 ProSiteProfiles Histidine kinase domain profile. 455 713 IPR005467 -
Cpe14g01030 1151 Pfam Response regulator receiver domain 1018 1141 IPR001789 GO:0000160
Cpe14g01030 1151 Gene3D - 516 714 IPR036890 -
Cpe14g01030 1151 ProSiteProfiles Response regulatory domain profile. 1017 1147 IPR001789 GO:0000160
Cpe14g01030 1151 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 436 515 IPR036097 GO:0000155|GO:0007165
Cpe14g01030 1151 CDD HisKA 449 510 IPR003661 GO:0000155|GO:0007165
Cpe14g01030 1151 Pfam His Kinase A (phospho-acceptor) domain 449 514 IPR003661 GO:0000155|GO:0007165
Cpe14g01030 1151 SMART HisKA_10 448 514 IPR003661 GO:0000155|GO:0007165
Cpe14g01030 1151 PANTHER OSMOSENSOR HISTIDINE KINASE 136 1148 - -
Cpe14g01030 1151 PANTHER OSMOSENSOR HISTIDINE KINASE 1 133 - -
Cpe14g01030 1151 MobiDBLite consensus disorder prediction 972 1000 - -
Cpe14g01030 1151 Gene3D - 436 515 - -
Cpe14g01030 1151 SMART HKATPase_4 561 713 IPR003594 -
Cpe14g01030 1151 MobiDBLite consensus disorder prediction 972 1010 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe14g01030 Cpe-Chr14:8659658 Cpe16g00390 Cpe-Chr16:5476764 7.57E-15 dispersed
Cpe07g00860 Cpe-Chr7:7780854 Cpe14g01030 Cpe-Chr14:8659658 6.21E-26 transposed
Cpe14g01030 Cpe-Chr14:8659658 Cpe08g01314 Cpe-Chr8:9453335 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50564 PF02518 HATPase_c 6.70E-23 CL0025 Cpe TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g01030 - - csv:101217761 2039.23