Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g01040 ATGGAAAGGGAGGGATTTGAGGTGGGATTGGTGTTGCATCCATTTCGGATGTGGAGGAATTGGAGGCTGGCTCTGCCATGTGCCGATCGTCACTTGCGTCGTCGGGGCGGCGGCGGTGGTTCGGATTCGGTTGGCTGCCAAGATGGGCTACTTTGGTACAAGGACCATGGGCACCACATCAATGGAGAATTTTCAATGGCTGTTGTTCAAGCCAACAATTTACTTGAGGATCAGAGCCAGCTTGAGTCTGGTCCTTTGAGCTTGCTTGAGTCTGGACCCTATGGAACGTTTGTCGGAATATACGACGGTCATGGTGGCCCCGAGACGTCGCGGTTCATATGTGATAACTTGTTCCAGCATCTCAAAGTGTTTGCTACTGAAGAAAAGGCAATGTCTGTAAATGTGATAAAGAAAGCATTCCAAGCAACAGAAGAGGGGTTTCTCTCTATTGTCACCAAGCAATGGCCTATGAACCCGCAGATTGCGGCCGTTGGTTCGTGCTGTCTGGTTGCTGTGATTTGTAATGGGAAACTCTACGTTGCGAATCTTGGCGACTCCCGAGCTGTGTTGGGGAGGCTTGTTCGGTCGACGGGGGAAGTTCTTCCTATTCAGCTGTCGTCGGAGCACAATGTAAGCATACAATCAGTCCGCCAGGAGATGCAGTCTATGCACCCAGATGACTCCCAGATAGTAGTGTTGAAGCATAACGTATGGCGCGTAAAGGGCTTGATTCAGATTTCTCGGTCGATTGGAGACGTGTATCTCAAAAAGCCAGAGTTTAACCGGGAGCCTTTGTATACTAAGTTTCGTCTCCGAGAGCCCTTCAGTAAGCCTATTCTGAGCTCAGAACCTGCGGTCTCTGTGCATGAACTCGATCCAAACGATCAATTTCTCATATTTGCCTCTGATGGGCTGTGGGAGCACCTAAGCAGCCAGGATGCAGTTGATATAGTTCACAAGCATCCTCACAGTGGAAGTGCAAGGAGGCTGGTGAAAGCGGCAATGCAGGAAGCAGCTAAGAAACGAGAAATGCGATACTCAGACTTGAAGAAGATCGATCGTGGGGTTCGGCGTCATTTTCACGATGACACAACGGTGATAGTCGTGTTTCTGGGTTCAAGCAGAGGGGAAAGAAGCCCTGTTTTGTCTGTGAGAGGGGGAGGAGTGAAGGTATATGCGAAGTCAGGGCTGAACACTGCCCCTTCGTAA 1209 50.04 MEREGFEVGLVLHPFRMWRNWRLALPCADRHLRRRGGGGGSDSVGCQDGLLWYKDHGHHINGEFSMAVVQANNLLEDQSQLESGPLSLLESGPYGTFVGIYDGHGGPETSRFICDNLFQHLKVFATEEKAMSVNVIKKAFQATEEGFLSIVTKQWPMNPQIAAVGSCCLVAVICNGKLYVANLGDSRAVLGRLVRSTGEVLPIQLSSEHNVSIQSVRQEMQSMHPDDSQIVVLKHNVWRVKGLIQISRSIGDVYLKKPEFNREPLYTKFRLREPFSKPILSSEPAVSVHELDPNDQFLIFASDGLWEHLSSQDAVDIVHKHPHSGSARRLVKAAMQEAAKKREMRYSDLKKIDRGVRRHFHDDTTVIVVFLGSSRGERSPVLSVRGGGVKVYAKSGLNTAPS 402
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8734462 8737418 + Cp4.1LG14g10360.1 Cpe14g01040 481424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g01040 402 SMART PP2C_4 55 369 IPR001932 -
Cpe14g01040 402 PANTHER ALPHABET, ISOFORM E-RELATED 39 394 - -
Cpe14g01040 402 SUPERFAMILY PP2C-like 75 372 IPR036457 -
Cpe14g01040 402 ProSitePatterns PPM-type phosphatase domain signature. 97 105 IPR000222 GO:0043169
Cpe14g01040 402 Gene3D - 53 378 IPR036457 -
Cpe14g01040 402 ProSiteProfiles PPM-type phosphatase domain profile. 63 371 IPR001932 -
Cpe14g01040 402 PANTHER PROTEIN PHOSPHATASE 2C 60-RELATED 39 394 - -
Cpe14g01040 402 CDD PP2Cc 95 371 IPR001932 -
Cpe14g01040 402 Pfam Protein phosphatase 2C 96 340 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe14g01040 Cpe-Chr14:8734462 Cpe16g00325 Cpe-Chr16:5096653 0 dispersed
Cpe10g00688 Cpe-Chr10:3957063 Cpe14g01040 Cpe-Chr14:8734462 4.36E-119 wgd
Cpe14g01040 Cpe-Chr14:8734462 Cpe19g00880 Cpe-Chr19:6451702 0 wgd
Cpe14g01040 Cpe-Chr14:8734462 Cpe04g00604 Cpe-Chr4:6319570 2.57E-120 wgd
Cpe14g01040 Cpe-Chr14:8734462 Cpe08g01306 Cpe-Chr8:9397628 1.09E-79 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g01040 K01102 - csv:101220137 678.322