Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g01056 ATGATGGAGTGGGAAAAGGCTGAGCACCAAACTCCGTACCACCACCAGAACCCTCCTCTTCGAGACGATCACCTCCATCATCTCACCGGAACTACCGCCGGCGCTCTCTACGTCAAAGTCATGACCGACGAGCAATTGGAGACTCTTCGCAAGCAAATTGCTGTTTACGCCACCATTTGCGAGCAGCTCGTTGAGATGCACAAGACACTCACTGCTCACCAGGATCTCACAGGAATGAGGTTGGGTAACATGTACTGTGAGCCACTGATGACATCTTCCAGCCACAAAATCACTTCTAGACAGCGATGGACTCCAACGCCTGTGCAACTTCAGATCTTGGAGCGCATATTCGAGCAAGGGAATGGAACTCCCAGCAAGCAGAAGATCAAAGAGATCACCTCTGAACTGGGTCAGCATGGCCAAATTTCTGAATCTAATGTCTATAACTGGTTCCAAAACAGGCGTGCTCGATCGAAGAGGAAGCAGCAAAGCACAACACCCGCCTATGGTGAATCAGAAGTGGAGACAGAAGTCGAGTCGCCGAAAGATAAGAAGACGAAACCTGTGGATTTTCAAACTCATCAGACCTCTGCACCTTTGGGGGAGGACATGTGCTTCCAGAGTCCGGAGATGAGTTCTGAACTGCATTTCCTGGATCCAAACACCAACAAAGCTGATACTTTGTTTTCAAATGGAAGTTTAAAAAGTGCAAGAAGTTTCAGCCAGATGTCTTTTTATGAGGGAAACGAGCAGCTGACAGGAAAGATTGAAACGCCAGAGAACTATAGTCTTTACCAGCAAGCGGAAGGCTACAGCATGACCGAACGACCCTGA 834 48.56 MMEWEKAEHQTPYHHQNPPLRDDHLHHLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQLVEMHKTLTAHQDLTGMRLGNMYCEPLMTSSSHKITSRQRWTPTPVQLQILERIFEQGNGTPSKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQSTTPAYGESEVETEVESPKDKKTKPVDFQTHQTSAPLGEDMCFQSPEMSSELHFLDPNTNKADTLFSNGSLKSARSFSQMSFYEGNEQLTGKIETPENYSLYQQAEGYSMTERP 277
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8820899 8830214 - Cp4.1LG14g10580.1 Cpe14g01056 481440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g01056 277 MobiDBLite consensus disorder prediction 156 189 - -
Cpe14g01056 277 MobiDBLite consensus disorder prediction 175 189 - -
Cpe14g01056 277 Pfam Homeodomain 100 160 IPR001356 GO:0003677
Cpe14g01056 277 CDD homeodomain 100 162 IPR001356 GO:0003677
Cpe14g01056 277 PANTHER - 2 274 - -
Cpe14g01056 277 ProSiteProfiles 'Homeobox' domain profile. 96 161 IPR001356 GO:0003677
Cpe14g01056 277 Gene3D - 102 167 - -
Cpe14g01056 277 SUPERFAMILY Homeodomain-like 96 163 IPR009057 -
Cpe14g01056 277 PANTHER WUSCHEL-RELATED HOMEOBOX 13 2 274 IPR044559 GO:0003700
Cpe14g01056 277 SMART HOX_1 98 165 IPR001356 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00017 Cpe-Chr6:80276 Cpe14g01056 Cpe-Chr14:8820899 1.60E-87 dispersed
Cpe14g01056 Cpe-Chr14:8820899 Cpe04g01371 Cpe-Chr4:11141487 2.13E-15 dispersed
Cpe14g01056 Cpe-Chr14:8820899 Cpe02g00030 Cpe-Chr2:157492 9.71E-94 wgd
Cpe14g01056 Cpe-Chr14:8820899 Cpe08g01292 Cpe-Chr8:9330777 3.32E-38 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50566 PF00046 Homeodomain 8.80E-19 CL0123 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g01056 - - csv:101203410 521.931