Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe14g01071 ATGTGTGATGCGAAGGAGAAACAGGAATCTGCACAGGATGTTCCAGTTGCTTTAAGTGAAGGCAACCAAGTTAATGCGAAAGATGAGCTCCATGATTCTCTCTGTGTGACAGCTGAGGCAACTCCCAACTCATGTGAAAAAGTGATTGACTCACCTGAGATTCTTGTCAAAACTGGCCCTGATGAGTTGCCCCCAAGGGAGTTGGGTTTAGATGCTGCTACTTCCAACTCTCACATAGAAACTGTCCAGTCCTCCATGGATGCCAAATCTGAGGCCTTTGAGATGCCTGAAACTAAAACTGGTTCTCTTGATCATGCTTTAATCGCAAATCATGATGAACCTGTAACTCCCCATCCAATGCCATCTTGTATTAAAGCGGAAACAGAAAATGCCATAGGGTTGAAGCTCAATGAAGACAGTGTTACTACACCTCATAATGGGCATACAAATATGAGTCACTCGTTTATTTTGGATGAAAATCATATTGCTGAAGGTAGTGAATCCGGAACAGAAGAAGAGCAATCTGCTTTCATGAAGGAGCTTGAGAACTTCTTCAGAGAAAGAAGCCTGGAGTTCAAACCTCCCAAGTTCTATGGAGAGGGTCTGAATTGCCTCAAGTTATGGAGGGCTGTGACTAGATTGGGAGGCTATGACAAGGTATATTCTGTTGTTCTTTCTGTAATGACCACTGTGTTTCTTGTCTGGCGTGACTTCATGCAAGTTGTGGCGGCAAGTAGGAGAGTCTTTCAAGCCCCCAAAGCTCTCCTTGATTATGAGAGGCATAAAACCCATGGTGGTGAACTTAGTGTACCTATTGCTTCCAACTCAGAACCTATGAGTATTGAAAACCAGGGACCAGGATCAGGTAGAGCACGAAGAGATGCTGCAGCACGTGCCATGCAGGGTTGGCACTCACGTCTACTGGGAAATGGTGAAGTTAGTGACCCTATTATCAAGGATAAGAACTCACTTTCAATGCAGAAAAGGGAAAAACAACTTAAAAGCATTGGTCTTCTTAAACGCAAGAAATCATCTTACATGGAGCATGCCATGAAATCAGCACGTACAAAATCACCCAAACCACAGCTGGACGTAGCAGTAGTTGATATTGGACAACCAGCCGACTGGGTCAAAGTCAATGTGCAGAAAACTAAAGATTGTTATGAGGTCTATGCATTAGTTCCCGGACTACTTCGTGAGGAGGTGCGTGTTCAGTCTGATCCGGCGGGACGCTTGGTAATTAGTGGTGAACCCGAACATCCTGATAATCCATGGGGTGTCACACCCTTCAAAAAGGTGGTCAGCCTACCGTCGAGGATTGATCCACATCAGACTTCTGCCGTTGTCACCTTACACGGACAGTTGTTTGTTCGTGTTCCATTTGAACAGTTGGAATGA 1398 44.85 MCDAKEKQESAQDVPVALSEGNQVNAKDELHDSLCVTAEATPNSCEKVIDSPEILVKTGPDELPPRELGLDAATSNSHIETVQSSMDAKSEAFEMPETKTGSLDHALIANHDEPVTPHPMPSCIKAETENAIGLKLNEDSVTTPHNGHTNMSHSFILDENHIAEGSESGTEEEQSAFMKELENFFRERSLEFKPPKFYGEGLNCLKLWRAVTRLGGYDKVYSVVLSVMTTVFLVWRDFMQVVAASRRVFQAPKALLDYERHKTHGGELSVPIASNSEPMSIENQGPGSGRARRDAAARAMQGWHSRLLGNGEVSDPIIKDKNSLSMQKREKQLKSIGLLKRKKSSYMEHAMKSARTKSPKPQLDVAVVDIGQPADWVKVNVQKTKDCYEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVSLPSRIDPHQTSAVVTLHGQLFVRVPFEQLE 465
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8914368 8919902 - Cp4.1LG14g10660.1 Cpe14g01071 481455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe14g01071 465 MobiDBLite consensus disorder prediction 1 25 - -
Cpe14g01071 465 Gene3D - 354 465 IPR008978 -
Cpe14g01071 465 SUPERFAMILY HSP20-like chaperones 376 461 IPR008978 -
Cpe14g01071 465 SMART ARID_2 168 259 - -
Cpe14g01071 465 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 365 465 IPR002068 -
Cpe14g01071 465 Pfam Hsp20/alpha crystallin family 382 462 IPR002068 -
Cpe14g01071 465 CDD ACD_sHsps_p23-like 384 460 - -
Cpe14g01071 465 CDD ARID 176 220 - -
Cpe14g01071 465 Pfam ARID/BRIGHT DNA binding domain 174 242 IPR001606 GO:0003677
Cpe14g01071 465 Gene3D - 157 266 IPR036431 GO:0003677
Cpe14g01071 465 SMART bright_3 172 264 IPR001606 GO:0003677
Cpe14g01071 465 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT 105 463 IPR045147 GO:0006357
Cpe14g01071 465 MobiDBLite consensus disorder prediction 269 293 - -
Cpe14g01071 465 ProSiteProfiles ARID domain profile. 171 271 IPR001606 GO:0003677
Cpe14g01071 465 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 6-LIKE 105 463 - -
Cpe14g01071 465 SUPERFAMILY ARID-like 166 271 IPR036431 GO:0003677
Cpe14g01071 465 MobiDBLite consensus disorder prediction 269 283 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe14g01071 Cpe-Chr14:8914368 Cpe02g00012 Cpe-Chr2:85595 1.33E-117 wgd
Cpe14g01071 Cpe-Chr14:8914368 Cpe08g01275 Cpe-Chr8:9220943 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50569 PF00011 HSP20 7.30E-06 CL0190 Cpe TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe14g01071 - - cmax:111465194 822.772