Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00049 ATGGCTGGAGATGGATTTGGATTCCCTGTGGAATCTCAGGCGGTTTCGGTGAAGAAGAAGACGGCGACCACGACAACGACCACGACGACGAAGAAGAAGAATACTGTAGTTTCCAGGAGCTGGGTTTCGTTGGACCATGAAGGAAGGACTACGGTTTTGGACGTGGATAAGTATGCGCTTATGCAGAGAGTTCAGATTAATGCGAGAGATCTTCGGCTTCTTGATCCTCTGTTGTCGTATCCTTCCACTATCTTGGGCAGAGAAAGCGTGATTGTTCTCAATTTGGAGCACATCAAGTCAATAATCACTGCAGACGAGGTGCTGCTTAGAGACCCAATGGATGAAAATGTAGTTCCAATTGTTGAAGAATTGCAGAGACGGTTGCCTTCCACAAATTCCCTGTACCAAGGACAAGGGGAAGAAGAAGAGCCTTCCACCACTCAAAATGAGTTGGCTGAAAACGAATTTCCATTTGAGTTTCGTGCTTTAGAGGTCGCATTAGAAGCAATTTGTAGTTTTCTTGATGCACGCACAAGAGAACTGGAGACTGATACGTATCCTGCTTTAGATGAGCTGACCTCCAAGATTAGCAGTCGTAACTTGGATCGAGTGCGCAAGCTGAAGAGTGCAATGACAAGGTTGACAAATCGGGTGCAAAAGGTTAGGGATGAACTCGAACAACTTCTGGATGACGACGACGACATGGCGGAGCTTTACTTGTCACGAAAAGTAGCTGGCACCCCTGAAAGCGGCTCTGGGACTCCAATTTGGTTTCTTGCTTCTCCTAAGGACTATTCAAAGATGTCTAAAACAAGTAGAGCAAGTGCAATTACTTTTCGAGGAGAGAATGATGTTGAGGAACTAGAAATGTTACTCGAGGCTTATTTTATGCAGATTGAAGGTACATTAAACAAACTAATCACGTTGCGGGAATACATTGATGACACAGAGGATTACATCAATATTCAGCTTGACAATCACAGGAATCAATTGATTCAGCTTGAACTCTTTTTGAGCTCTGGGACTGTTTGTTTGTCTATTTATTCTTTAGTGACTGCGATATTTGGAATGAATATCCCATATACCTGGAAGGAAGATCATGAACATGTATTCAAATGGGTGGTCATCCTGACAGGAATAGTTTGTGCAACCATTTATGTGTCACTAAGCTCCTATGCACGATCCAAAGGTCTCGTTGGATCTTGA 1206 43.62 MAGDGFGFPVESQAVSVKKKTATTTTTTTTKKKNTVVSRSWVSLDHEGRTTVLDVDKYALMQRVQINARDLRLLDPLLSYPSTILGRESVIVLNLEHIKSIITADEVLLRDPMDENVVPIVEELQRRLPSTNSLYQGQGEEEEPSTTQNELAENEFPFEFRALEVALEAICSFLDARTRELETDTYPALDELTSKISSRNLDRVRKLKSAMTRLTNRVQKVRDELEQLLDDDDDMAELYLSRKVAGTPESGSGTPIWFLASPKDYSKMSKTSRASAITFRGENDVEELEMLLEAYFMQIEGTLNKLITLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSIYSLVTAIFGMNIPYTWKEDHEHVFKWVVILTGIVCATIYVSLSSYARSKGLVGS 401
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 327493 332167 + Cp4.1LG15g00460.1 Cpe15g00049 481507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00049 401 Gene3D - 23 112 - -
Cpe15g00049 401 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 337 388 IPR045863 -
Cpe15g00049 401 MobiDBLite consensus disorder prediction 129 149 - -
Cpe15g00049 401 Gene3D Magnesium transport protein CorA, transmembrane region 115 331 - -
Cpe15g00049 401 Pfam CorA-like Mg2+ transporter protein 287 386 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cpe15g00049 401 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 25 401 IPR039204 -
Cpe15g00049 401 Gene3D Magnesium transport protein CorA, transmembrane region 338 392 - -
Cpe15g00049 401 CDD Mrs2_Mfm1p-like 41 398 IPR039204 -
Cpe15g00049 401 Coils Coil 204 231 - -
Cpe15g00049 401 PANTHER MAGNESIUM TRANSPORTER MRS2-LIKE PROTEIN 25 401 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe12g00161 Cpe-Chr12:1043975 Cpe15g00049 Cpe-Chr15:327493 4.48E-176 dispersed
Cpe14g00327 Cpe-Chr14:1953465 Cpe15g00049 Cpe-Chr15:327493 4.58E-85 dispersed
Cpe15g00049 Cpe-Chr15:327493 Cpe17g00172 Cpe-Chr17:1096894 2.40E-88 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00049 K16075 - csv:101220452 699.123