Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe15g00053 | ATGGAAGAGCTTGAAGAAGCTAACAGAGCCGCCATAGATAGCTGTCATGGAGTTTTGAATCTTTTAGCTCACCCTTCTCCTCAAGAACAAGGTGAGCTGAGGAAGAATTTAATGGTGGAAACTGGAGAGGCTGTTTTTAAGCTCAAGAAAGTGGTATCTCTTTTGAATTCTGGGTTTGGTTATGCAAAAGTTAGAAGATTCAAGAACATTCCTCTGCCTTTACCCCAAAAATTTCTCTTAGATCCTCCAAACAATGGTTTGAATGGTAAAATTTCTGTTTTTTTGGGAAACCCAGATTTGGAAATGGATCAAAATCATAAGAATTCCCTCAAAATTCATAAACAAGCTGCTCCATCTTTGAACTTTAGCTTCCCCCAGCAACAGCAGCAGCAGAGGAAGCAAGCAGAGATGATGTTTCTTAGGAGTAACAGTGGAATGAATATGAATTTTGATGCTTCTAAGTGCACATTGACAATGTCATCTGCTAGATCTTTTATTTCTTCGTTGAGTATGGACGGGAGCGTTGCGGACGGGAGCTCGTTCCATTTGATCGGACCGTCGTCGACGATGTCGGGCGATAACAAGAGGAGGTTTTCTGGAAGGGGAGATGAAGGGAGCTTGAAATGTGGTAGCACTGGCAAGTGCCATTGCTCAAAGAAGAGGAAACATCGAGTGAAGAGATCAATTAAGGTTCCTGCTATAAGTAACAAACTTGCTGATATCCCTTCTGATGATTATTCATGGAGGAAATATGGGCAGAAGCCAATTAAGGGTTCTCCTCATCCCAGGGGTTACTACAAATGCAGCAGCATGAGAGGTTGTCCAGCGAGAAAGCACGTCGAGCGATGCTTAGAAGACCCGTCGATGCTTATCGTAACGTACGAAGGAGAGCATAATCACCCGAAAATGTCGACGCAATCTGCACACACTTAG | 933 | 43.19 | MEELEEANRAAIDSCHGVLNLLAHPSPQEQGELRKNLMVETGEAVFKLKKVVSLLNSGFGYAKVRRFKNIPLPLPQKFLLDPPNNGLNGKISVFLGNPDLEMDQNHKNSLKIHKQAAPSLNFSFPQQQQQQRKQAEMMFLRSNSGMNMNFDASKCTLTMSSARSFISSLSMDGSVADGSSFHLIGPSSTMSGDNKRRFSGRGDEGSLKCGSTGKCHCSKKRKHRVKRSIKVPAISNKLADIPSDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEDPSMLIVTYEGEHNHPKMSTQSAHT | 310 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 343905 | 346634 | + | Cp4.1LG15g00430.1 | Cpe15g00053 | 481511 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe15g00053 | 310 | Gene3D | WRKY domain | 226 | 302 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe15g00053 | 310 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 3 | 310 | IPR044810 | GO:0003700 | |
Cpe15g00053 | 310 | SUPERFAMILY | WRKY DNA-binding domain | 240 | 302 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe15g00053 | 310 | ProSiteProfiles | WRKY domain profile. | 237 | 303 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe15g00053 | 310 | SMART | WRKY_cls | 242 | 302 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe15g00053 | 310 | Pfam | Plant zinc cluster domain | 206 | 240 | IPR018872 | - | |
Cpe15g00053 | 310 | Pfam | WRKY DNA -binding domain | 244 | 301 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe15g00053 | 310 | PANTHER | WRKY TRANSCRIPTION FACTOR 74-RELATED | 3 | 310 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe15g00053 | Cpe17g00877 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe12g01060 | Cpe-Chr12:8808822 | Cpe15g00053 | Cpe-Chr15:343905 | 1.47E-25 | dispersed | |
Cpe15g00053 | Cpe-Chr15:343905 | Cpe17g00877 | Cpe-Chr17:6822550 | 4.81E-124 | dispersed | |
Cpe15g00053 | Cpe-Chr15:343905 | Cpe05g00044 | Cpe-Chr5:230004 | 4.56E-128 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
50572 | PF03106 | WRKY | 9.90E-27 | CL0274 | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe15g00053 | - | - | cmax:111466947 | 624.394 |