Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00053 ATGGAAGAGCTTGAAGAAGCTAACAGAGCCGCCATAGATAGCTGTCATGGAGTTTTGAATCTTTTAGCTCACCCTTCTCCTCAAGAACAAGGTGAGCTGAGGAAGAATTTAATGGTGGAAACTGGAGAGGCTGTTTTTAAGCTCAAGAAAGTGGTATCTCTTTTGAATTCTGGGTTTGGTTATGCAAAAGTTAGAAGATTCAAGAACATTCCTCTGCCTTTACCCCAAAAATTTCTCTTAGATCCTCCAAACAATGGTTTGAATGGTAAAATTTCTGTTTTTTTGGGAAACCCAGATTTGGAAATGGATCAAAATCATAAGAATTCCCTCAAAATTCATAAACAAGCTGCTCCATCTTTGAACTTTAGCTTCCCCCAGCAACAGCAGCAGCAGAGGAAGCAAGCAGAGATGATGTTTCTTAGGAGTAACAGTGGAATGAATATGAATTTTGATGCTTCTAAGTGCACATTGACAATGTCATCTGCTAGATCTTTTATTTCTTCGTTGAGTATGGACGGGAGCGTTGCGGACGGGAGCTCGTTCCATTTGATCGGACCGTCGTCGACGATGTCGGGCGATAACAAGAGGAGGTTTTCTGGAAGGGGAGATGAAGGGAGCTTGAAATGTGGTAGCACTGGCAAGTGCCATTGCTCAAAGAAGAGGAAACATCGAGTGAAGAGATCAATTAAGGTTCCTGCTATAAGTAACAAACTTGCTGATATCCCTTCTGATGATTATTCATGGAGGAAATATGGGCAGAAGCCAATTAAGGGTTCTCCTCATCCCAGGGGTTACTACAAATGCAGCAGCATGAGAGGTTGTCCAGCGAGAAAGCACGTCGAGCGATGCTTAGAAGACCCGTCGATGCTTATCGTAACGTACGAAGGAGAGCATAATCACCCGAAAATGTCGACGCAATCTGCACACACTTAG 933 43.19 MEELEEANRAAIDSCHGVLNLLAHPSPQEQGELRKNLMVETGEAVFKLKKVVSLLNSGFGYAKVRRFKNIPLPLPQKFLLDPPNNGLNGKISVFLGNPDLEMDQNHKNSLKIHKQAAPSLNFSFPQQQQQQRKQAEMMFLRSNSGMNMNFDASKCTLTMSSARSFISSLSMDGSVADGSSFHLIGPSSTMSGDNKRRFSGRGDEGSLKCGSTGKCHCSKKRKHRVKRSIKVPAISNKLADIPSDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEDPSMLIVTYEGEHNHPKMSTQSAHT 310
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 343905 346634 + Cp4.1LG15g00430.1 Cpe15g00053 481511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00053 310 Gene3D WRKY domain 226 302 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe15g00053 310 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 3 310 IPR044810 GO:0003700
Cpe15g00053 310 SUPERFAMILY WRKY DNA-binding domain 240 302 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe15g00053 310 ProSiteProfiles WRKY domain profile. 237 303 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe15g00053 310 SMART WRKY_cls 242 302 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe15g00053 310 Pfam Plant zinc cluster domain 206 240 IPR018872 -
Cpe15g00053 310 Pfam WRKY DNA -binding domain 244 301 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe15g00053 310 PANTHER WRKY TRANSCRIPTION FACTOR 74-RELATED 3 310 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe15g00053 Cpe17g00877 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe12g01060 Cpe-Chr12:8808822 Cpe15g00053 Cpe-Chr15:343905 1.47E-25 dispersed
Cpe15g00053 Cpe-Chr15:343905 Cpe17g00877 Cpe-Chr17:6822550 4.81E-124 dispersed
Cpe15g00053 Cpe-Chr15:343905 Cpe05g00044 Cpe-Chr5:230004 4.56E-128 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50572 PF03106 WRKY 9.90E-27 CL0274 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00053 - - cmax:111466947 624.394