Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00069 ATGGCGTCTTCTTCTTCTTCTTCTAGTACTGCAAATAGTAGCGTGTCGGGCGGCGGCGGCGGCGGCGGCGGTGGCGGTGGTGGTGGCTCTCCTTGTGGAGCATGCAAGTTTCTGCGGCGGAAATGTGTGGCTGAGTGTATTTTTGCTCCTTACTTTAGCTCGGAACAAGGGGCTGCAAGATTTGCCGCCGTTCATAAAGTGTTTGGGGCTAGTAATGTGTCTAAGTTGCTGCTTCATGTCCCTGCTCATGATCGCTGTGAGGCTGTTGTTACTATTGCTTATGAAGCTCAAGCAAGGATTCTTGACCCTGTTTATGGCTCACAATTGATGCAAGCCAAGGCTCAACTTGCCCAAACCCTGATGGAATCAGGAGGCAACATGGAGCTTCAATGGACAGGGAGCTTCAATAACAATCTCTCCAATGGAATCCCAAGCAATTATGAGACTCAAATTATGAACCCAGCAGTTTCCCCACAGAGCTCAGTGGAATCAGCAGCCAACAACGATGCAGCATTAATGTTCATGAACCATTATCAAGAGAGCCAAACATTGGCTAGAAGAAGATCAGCTTCATGTCATGGTGATCTTGGGGAGCTTCAAGCTTTGGCCCTTAGAATGATGAGAAACTAA 630 48.25 MASSSSSSSTANSSVSGGGGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARFAAVHKVFGASNVSKLLLHVPAHDRCEAVVTIAYEAQARILDPVYGSQLMQAKAQLAQTLMESGGNMELQWTGSFNNNLSNGIPSNYETQIMNPAVSPQSSVESAANNDAALMFMNHYQESQTLARRRSASCHGDLGELQALALRMMRN 209
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 496207 497773 + Cp4.1LG15g00690.1 Cpe15g00069 481527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00069 209 Pfam Lateral organ boundaries (LOB) domain 31 115 IPR004883 -
Cpe15g00069 209 MobiDBLite consensus disorder prediction 1 17 - -
Cpe15g00069 209 PANTHER LOB DOMAIN CONTAINING PROTEIN 25 208 - -
Cpe15g00069 209 MobiDBLite consensus disorder prediction 1 23 - -
Cpe15g00069 209 ProSiteProfiles LOB domain profile. 30 132 IPR004883 -
Cpe15g00069 209 PANTHER LOB DOMAIN-CONTAINING PROTEIN 16 25 208 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g00055 Cpe15g00069 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe15g00069 Cpe-Chr15:496207 Cpe05g00056 Cpe-Chr5:278815 2.48E-42 dispersed
Cpe15g00069 Cpe-Chr15:496207 Cpe15g00070 Cpe-Chr15:502522 3.82E-42 tandem
Cpe15g00069 Cpe-Chr15:496207 Cpe05g00055 Cpe-Chr5:277418 1.09E-76 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50576 PF03195 LOB 8.40E-31 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00069 K13944 - csv:101214521 262.692