Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00070 ATGACAGGTTCTGGTTCTCCCTGTGGAGCCTGTAAGTTCTTGAGAAGAAAATGTGTCAGAGGCTGCGTTTTTGCGCCATATTTCTGCCATGAACAAGGCGCTACTCATTTTGCTGCTATTCATAAGGTGTTTGGTGCTAGCAATGTGTCTAAGCTTCTTGCTCGTTTGCCTGTTAGTGAGCGTTGTGAGGCTGCTGTTACTATCTCTTATGAAGCTCAAGCTAGGCTTCAAGATCCTATTTATGGCTGTGTTTCTCATATCTTTGCCCTCCAACAACAGGTTGTGAGTCTTCAAGCACAACTAGCTTCTCTTAAGGAACAAGCAGCAGAAAACATGATGAACGTGTCTGGTAATAGAGGTGAGGCTGAGAAGAATAGCAGAAAGGTTCCTTGTCATCCACAAGATCTCCATAGCTGGTTTCAGTCGGAGCAACCGAACGTAATGCTCGAGTTCAATCCGAATCCGACTCGGAATAATTCGGCATCGAACCCTTATTATGATGAGAATTATAGCATTATGGTTAATTCTCAGTCCAATGAGAACTATGAGCATCACATGGCTAAAATGGAGGAAAGTGGATCATATGAAAGCTTTGAAGAAACCTCAGGCTATTCCATGTATACTCTTGATCACTTGCATTCAAATGTTCAACAATGGAGCTTCAATGAGTCTGCTGATGATTTACAATCAGTTGCTTTTGGTAATAGGCATTGGTAA 717 42.26 MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSERCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENMMNVSGNRGEAEKNSRKVPCHPQDLHSWFQSEQPNVMLEFNPNPTRNNSASNPYYDENYSIMVNSQSNENYEHHMAKMEESGSYESFEETSGYSMYTLDHLHSNVQQWSFNESADDLQSVAFGNRHW 238
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 502522 503961 - Cp4.1LG15g00780.1 Cpe15g00070 481528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00070 238 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Cpe15g00070 238 Coils Coil 87 114 - -
Cpe15g00070 238 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 235 - -
Cpe15g00070 238 Pfam Lateral organ boundaries (LOB) domain 7 105 IPR004883 -
Cpe15g00070 238 PANTHER LOB DOMAIN-CONTAINING PROTEIN-RELATED 1 235 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g00056 Cpe15g00070 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00055 Cpe-Chr5:277418 Cpe15g00070 Cpe-Chr15:502522 1.58E-52 dispersed
Cpe05g00056 Cpe-Chr5:278815 Cpe15g00070 Cpe-Chr15:502522 7.21E-152 dispersed
Cpe08g00686 Cpe-Chr8:5231278 Cpe15g00070 Cpe-Chr15:502522 1.66E-50 dispersed
Cpe12g00024 Cpe-Chr12:118526 Cpe15g00070 Cpe-Chr15:502522 9.51E-54 dispersed
Cpe15g00070 Cpe-Chr15:502522 Cpe17g00315 Cpe-Chr17:2137602 1.37E-52 dispersed
Cpe15g00069 Cpe-Chr15:496207 Cpe15g00070 Cpe-Chr15:502522 3.82E-42 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50577 PF03195 LOB 5.40E-36 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00070 K13945 - csv:101214764 420.624