Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00078 ATGGCAAAGGAACAATTACAAGTACTAAATGCATTAGATGTTGCCAAAACACAATGGTACCATTTCACAGCAATCATCATTGCTGGAATGGGATTCTTCACTGATGCATATGATCTCTTCTGCATATCCCTTGTCACAAAATTACTTGGAAGAATCTACTATCATGTTGATGGTGCAAAAAAGCCTGGATCATTGCCTCCAAACGTTGCAGCTGCCGTTAACGGCGTAGCGTTCTGTGGAACGCTCGCAGGGCAACTCTTCTTCGGCTGGTTAGGCGATAAAATGGGACGAAAACGAGTCTATGGCTTAACTCTAATGCTGATGGTTATTTGCTCCATAGGCTCTGGCCTCTCCTTTGGCCACAATTCACATTGTGTCATGACTACTCTATGCTTCTTTCGATTCTGGCTCGGGTTCGGCATTGGTGGCGATTACCCTCTTTCAGCAACAATCATGTCGGAATACTCGAATAAGAAGACTCGTGGTGCGTTCATTGCTGCTGTGTTTGCTATGCAGGGATTTGGAATTTTAGGTGGCGGGATATTCGCCATTATCGTGTCGTCGGCATTTAAGTCGAAGTTTGATGCTCCATCTTATGCTGTTGATCCAGTTGCCTCTACAGTGCCACAAGCTGATTATGTTTGGAGGATTATACTAATGGTTGGTGCTCTTCCTGCTGCTCTTACTTACTACTGGAGGATGAAAATGCCCGAAACCGCACGCTACACCGCGCTTGTAGCGAAGGATACCGCTCAAGCTGCATCGGATATGTCGAAAGTTATGCAAATGGATATCGAGGGCGAAGGAGCAAAGGCTGCTGAGCCGACGCCAAGTGATAGTGTTAGTTCATATGGCTTGTTCTCCAAAGAGTTCTTTAGTCGCCATGGAACTCATTTACTTGGAACTACAAGCACTTGGTTTCTACTTGACATAGCCTTCTACAGCCAAAACTTGTTTCAAAAGGATATCTTTAGCGCCATTGGATGGATACCACCAGCAGCCACCATGAATGCACTTGAAGAGGTCTTTAGAATAGCAAGAGCTCAAACATTGATAGCCCTCTGCAGCACTGTCCCTGGCTATTGGTTCACAGTGGCTTTCATTGATAGAATTGGAAGATTTGCCATTCAACTAATGGGATTCTTCTTCATGACAGTCTTCATGTTTGCTTTAGCTATTCCATATCATCATTGGACGTTAAAGGACAATCGGATCGGGTTCGTTGTCCTCTACTCGTTAACGTTCTTCTTTGCTAACTTTGGACCGAATGCTACCACGTTCGTTGTCCCAGCTGAGATCTTCCCGGCACGATTCCGTTCGACTTGTCATGGTATATCATCAGCTGCAGGGAAGCTTGGAGCTATGGTGGGTGCGTTTGGTTTTCTATATTTGGCTCAAAACCAAGATAAGAACAAAACTGAGGCTGGATATCCTCCTGGGATTGGAGTTAAGAACTCGCTTTTGTTGTTGGGTGCACTTAACTTCTTGGGGATTTTGTTTACTTTTCTTGTCCCGGAAGCTAAGGGGAAATCGTTGGAAGAGATGTCGGGCGAGATCGAGGATAGTACCATTGGGGAATTGGGTGGCCAGACATCTTCTAGTACGACACAGTCACGTGTTTGA 1623 45.22 MAKEQLQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGSLPPNVAAAVNGVAFCGTLAGQLFFGWLGDKMGRKRVYGLTLMLMVICSIGSGLSFGHNSHCVMTTLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILGGGIFAIIVSSAFKSKFDAPSYAVDPVASTVPQADYVWRIILMVGALPAALTYYWRMKMPETARYTALVAKDTAQAASDMSKVMQMDIEGEGAKAAEPTPSDSVSSYGLFSKEFFSRHGTHLLGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNALEEVFRIARAQTLIALCSTVPGYWFTVAFIDRIGRFAIQLMGFFFMTVFMFALAIPYHHWTLKDNRIGFVVLYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSAAGKLGAMVGAFGFLYLAQNQDKNKTEAGYPPGIGVKNSLLLLGALNFLGILFTFLVPEAKGKSLEEMSGEIEDSTIGELGGQTSSSTTQSRV 540
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 560731 562353 + Cp4.1LG15g00730.1 Cpe15g00078 481536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00078 540 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 523 - -
Cpe15g00078 540 Pfam Sugar (and other) transporter 26 516 IPR005828 GO:0016021|GO:0022857|GO:0055085
Cpe15g00078 540 Gene3D MFS general substrate transporter like domains 20 532 IPR036259 -
Cpe15g00078 540 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 509 IPR020846 GO:0022857
Cpe15g00078 540 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-7-RELATED 1 523 - -
Cpe15g00078 540 MobiDBLite consensus disorder prediction 520 540 - -
Cpe15g00078 540 CDD MFS_PhT 25 508 - -
Cpe15g00078 540 SUPERFAMILY MFS general substrate transporter 12 516 IPR036259 -
Cpe15g00078 540 TIGRFAM 2A0109: phosphate:H+ symporter 11 518 IPR004738 GO:0005315|GO:0006817|GO:0016021
Cpe15g00078 540 MobiDBLite consensus disorder prediction 525 540 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01515 Cpe-Chr3:11869612 Cpe15g00078 Cpe-Chr15:560731 0 dispersed
Cpe05g00032 Cpe-Chr5:153023 Cpe15g00078 Cpe-Chr15:560731 0 dispersed
Cpe05g00061 Cpe-Chr5:306885 Cpe15g00078 Cpe-Chr15:560731 0 dispersed
Cpe06g00005 Cpe-Chr6:15335 Cpe15g00078 Cpe-Chr15:560731 0 dispersed
Cpe08g00332 Cpe-Chr8:2075312 Cpe15g00078 Cpe-Chr15:560731 0 dispersed
Cpe12g00143 Cpe-Chr12:916974 Cpe15g00078 Cpe-Chr15:560731 0 dispersed
Cpe14g00061 Cpe-Chr14:339794 Cpe15g00078 Cpe-Chr15:560731 0 dispersed
Cpe15g00078 Cpe-Chr15:560731 Cpe18g00433 Cpe-Chr18:5409720 2.35E-11 dispersed
Cpe15g00077 Cpe-Chr15:556813 Cpe15g00078 Cpe-Chr15:560731 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00078 K08176 - zju:107405539 906.36