Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00137 ATGGATGGCCGCACGGTGTTCACTTTGGCTGAGGTTGCCTCCCACGACAACCGCAACGACTGCTGGTTGATCATTGAGGATAAGGTATATGATGTGACAAAATTCCTCGAAGACCATCCTGGTGGTGATGAAGTCTTGTTGTCAAGCACTGGTAAGGATGCAACCAATGATTTTCTCGACGTCGGGCACAGCAGCGCTGCTAGTGCAATGATGGAAGAATTTTACGTAGGCGATATCGATAGCTCGGTTATTCCTGCAAAAGGAGAGTACATTCCTCCAAAGCAGCCCCTATACAACCAAGACAAGACACTGGAATTCATTATCAAGGTACTCCAGTTTCTAGCTCCCCTGGTAATTCTAGGTTTGGCTTTTGGCATCCACATCTATACCAAAACGACTTAA 402 46.52 MDGRTVFTLAEVASHDNRNDCWLIIEDKVYDVTKFLEDHPGGDEVLLSSTGKDATNDFLDVGHSSAASAMMEEFYVGDIDSSVIPAKGEYIPPKQPLYNQDKTLEFIIKVLQFLAPLVILGLAFGIHIYTKTT 133
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1084099 1087441 + Cp4.1LG15g01380.1 Cpe15g00137 481595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00137 133 PANTHER - 5 131 - -
Cpe15g00137 133 SMART Cyt_b5_2 7 80 IPR001199 -
Cpe15g00137 133 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 4 80 IPR001199 -
Cpe15g00137 133 PRINTS Cytochrome B5 signature 54 61 IPR001199 -
Cpe15g00137 133 PRINTS Cytochrome B5 signature 67 79 IPR001199 -
Cpe15g00137 133 PRINTS Cytochrome B5 signature 39 53 IPR001199 -
Cpe15g00137 133 PRINTS Cytochrome B5 signature 29 39 IPR001199 -
Cpe15g00137 133 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 35 42 IPR018506 GO:0020037
Cpe15g00137 133 Pfam Cytochrome b5-like Heme/Steroid binding domain 8 79 IPR001199 -
Cpe15g00137 133 Gene3D - 2 82 IPR036400 -
Cpe15g00137 133 PANTHER CYTOCHROME B5 5 131 - -
Cpe15g00137 133 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 84 IPR036400 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g00396 Cpe-Chr8:2509521 Cpe15g00137 Cpe-Chr15:1084099 8.26E-65 dispersed
Cpe13g00327 Cpe-Chr13:2946237 Cpe15g00137 Cpe-Chr15:1084099 3.39E-52 dispersed
Cpe17g00405 Cpe-Chr17:3020331 Cpe15g00137 Cpe-Chr15:1084099 3.93E-26 dispersed
Cpe07g01032 Cpe-Chr7:9307162 Cpe15g00137 Cpe-Chr15:1084099 5.13E-20 transposed
Cpe12g00095 Cpe-Chr12:569324 Cpe15g00137 Cpe-Chr15:1084099 2.35E-59 wgd
Cpe15g00137 Cpe-Chr15:1084099 Cpe05g00119 Cpe-Chr5:621104 1.68E-79 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00137 K23490 - csv:101212882 243.047