Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00159 ATGTTTGATTCCTTCTTCTTCTTCTTCTTGTTGTTGTTGATTGTATTCCCTCACTGTAAATCTTCTGAAATTTCCGCCGGTGGTCGGAGATTGCTTCACCAGCCATTTTTTCCGATTGATTCTGCTCCTCCGGCGGAGCAGCCATCGCCTCCGGTACCCCCACCGCCGAATCCCAAATACCCATTTTCCACTACCCCTCCTGCAACACCTGATGGGTCACCATTCTTTCCGACGTATCCTGCAACTCCACCTCCTCCAGCGCCGGCGAGTTTAGCCTCGTTTCCGGCTAATATATCTTCTCTGAATCTACCTCATTCGTCTGGTTACAGTTCCAAGAAGGTTGTTCCGTTGGTTATTGCTGGGGTTGTTTCCGCCGTCTTGGTAATCTGCATTGTAGGGTTTTTGTTCTGGCGGCGGCGGCGGGGTGGTCGTGGATTGGGCGATGGAAAGACGTATAGATCGGAGGATAGTAGCCGGTTGTCTCTGGTTCAGAATGTTGAAGTCGGTAATGGAATCCCTAAGTTGAGAAATCCGTCGGCTACTAGCTCTGAGTTTCTGTATTTAGGTACTCTTGTAAGCACGAGAGGGATCGACGAACGTTCCGTTGGCGGAGCTCGTGTTGTTGGTTCTAGGCCGTTGGATTCGCCGGAGCTTCATCCGCTTCCGCCGCTGAATCTAGGTCGGACGAATGAGAAGAAAAATCGCGAAAATGGAGAGGAGAAATCGATTGGAGATGAAGAGGAAGAGGAATTTTACTCTCCGAAAGGTTCTCTCGGCGCGATTGGATCGGGATCTCGACGAGTTCTCGCAACAATGGCGGCGGAAGATTTGCTTGGCAAAACCAGCGATTCGAGCTCGACTTCGTGTTCTACATCTAGCGGTTCCATTTCGCCGGCGAGATCATGTTCTAAGAGTCTCTCACTATCTCCACCGGCGAGTATGAGCCCTAGGAGATCCGTTCAACATGCGGAGCAGGTTTCCCACGGCGGAGGCGAATCAGACGGCGGCGTTAAATCTCATTGTCCATCTCCAATGCGTTTAGCGACGGAGAAGAACTCCACCGCATCTTCTTCCCGGAGATTTTCAAATGCTTCAATTCTCAGTGCGATTTTCCCGAATTTATCAACCGATAAGGATTTAGTTCATCGGAATTCAGATCCAGGCGAGCAGTTTCCTTCTTCTCCTTGTTTATTTCCTCTTTCAGATGGAATTTTAGGGCAAATTCAGATTCAACCGCCGATAGTTTCAAACGTTCCTGATTCGGATTCCGATGCAAAACTTAAGCAATTTCCTTACTCATTTACTTCATCTTCTCCTTCATCGTCACCGGAACGAGTAGTTTTGGACTCTTCTCCGTCGAGAACCTCCATTATTTCCGATCAAACCAGGTCTTCTCCACCATCACCAGAGAGAATTCTCAACCATTTTGATCAAGATGTGAAATCTTCTTCTAATGTGGCTCCTCCACCACCTCCACCTCCACCACCGCCACCGCCGCCACCACCACCACTGGTAGCACTCCCAGGACGCAGAGAAATGCCGATTTCTCCTAAAACACCAATGGATCAATCCATTACAAAGGCGGCTCCTCCATTAGTGCCTCCATTAAAGCCATTTCAAATGGAGAATCTGAAAAATGTATCACCAATTCAGCTGCCATCTTGCAAAAGCAATGGTGAATCATCTGAAGATACCCCCAAGCCCAAATTGAAGCCATTGCATTGGGATAAAGTAAGGGCTAGCTCTGATCGTGAGATGGTGTGGGATCAACTCAGATCAAGCTCTTTTAAAGTGAATGAGGAAATGATTGAAACTCTGTTTGTTGTGAACACTTCCAACTCGAAGGAGACAACTCCACGGCCTGTGTTTCCGACACCTAACCAAGAGATCGGAGTTCTCGATCCGAAGAAGTCGCAGAACATTGCGATCGCGTTACGAGCGCTTAATGTGACGATAGAAGAAGTTTGTGATGCCCTTTTAGAAGGTAATGCAGAAGCACTTGGAATAGAGCTACTTGAAAGCTTATTGAAAATGGCTCCAACAAAAGAAGAAGAACGCAAGCTAAAGGCATCAAAGGATGTCTCACCTACAAAATTTGGCCCAGCTGAGAAGTTTTTGAAGGCAATCCTTGATGTTCCTTTTGCATTCAAAAGGGTGGATGCAATGCTTTACATGGCAAATTTCGAGTCCGAGATCGAGTACCTAAAGAAGTCATTCGAAAATCTCGAGACTGCCTGTGAAGAATTGAGGAACAGCAGGATGTTCTTGAAACTTTTAGAAGCTGTACTCAAGACAGGGAATCGTATGAACGTTGGCACGAACCGTGGTGATGCCCACGCGTTCAAACTCGACACGCTTTTAAAACTTGTTGATGTCAAGGGTGCAGATGGAAAAACCACTCTTCTACATTTCGTCGTACAAGAAATCATAAGAAGCGAAGGAGCTCGTCTTTGTAACACGAGTTCTCCAAACTTGAACCCGAATGACGATATCAAATGCAGGAAGCTTGGTCTGCAAGTTGTTTCGAGTCTTAGCTCAGAGCTCAGCAACGTAAAGAAGGCTGCTTCGATGGATTCCGACGTGCTCAATGGCGAGGTCGTTAAGCTTTCGAGAGGACTCAACAACATTAGGGAGGCTCTACGTCTCAACGAAGCAGATGGACGAAACGATAGCACGGAAAAGTTCTCGTACTCGATGAGTAGATTCTTGAAAATGGCAGAAGAGGAACTGATTAGAATCCAAGCTCAGGAAAGTGTTGCATTATCTCTAGTAAAGGAGATCACTGAGTACTTCCATGGCAACTCTGCCAAGGAAGAAGCTCATCCATTTAGGATTTTCATGGTGGTTCGAGATTTCCTAACGGTTCTGGACGGAGTCTGCAAAGAAGTCGGGACGATAAACGAGCGGACGATCGTGAGTTCGGCTCATAAATTCCCAGTTCCGGTGAATCCGACATTACCACAAGCATTTCAAGCTCATCATAGAGTGCAGAAATACAGTTCTTCTGATGAAGAATGA 3018 46.85 MFDSFFFFFLLLLIVFPHCKSSEISAGGRRLLHQPFFPIDSAPPAEQPSPPVPPPPNPKYPFSTTPPATPDGSPFFPTYPATPPPPAPASLASFPANISSLNLPHSSGYSSKKVVPLVIAGVVSAVLVICIVGFLFWRRRRGGRGLGDGKTYRSEDSSRLSLVQNVEVGNGIPKLRNPSATSSEFLYLGTLVSTRGIDERSVGGARVVGSRPLDSPELHPLPPLNLGRTNEKKNRENGEEKSIGDEEEEEFYSPKGSLGAIGSGSRRVLATMAAEDLLGKTSDSSSTSCSTSSGSISPARSCSKSLSLSPPASMSPRRSVQHAEQVSHGGGESDGGVKSHCPSPMRLATEKNSTASSSRRFSNASILSAIFPNLSTDKDLVHRNSDPGEQFPSSPCLFPLSDGILGQIQIQPPIVSNVPDSDSDAKLKQFPYSFTSSSPSSSPERVVLDSSPSRTSIISDQTRSSPPSPERILNHFDQDVKSSSNVAPPPPPPPPPPPPPPPPLVALPGRREMPISPKTPMDQSITKAAPPLVPPLKPFQMENLKNVSPIQLPSCKSNGESSEDTPKPKLKPLHWDKVRASSDREMVWDQLRSSSFKVNEEMIETLFVVNTSNSKETTPRPVFPTPNQEIGVLDPKKSQNIAIALRALNVTIEEVCDALLEGNAEALGIELLESLLKMAPTKEEERKLKASKDVSPTKFGPAEKFLKAILDVPFAFKRVDAMLYMANFESEIEYLKKSFENLETACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRSEGARLCNTSSPNLNPNDDIKCRKLGLQVVSSLSSELSNVKKAASMDSDVLNGEVVKLSRGLNNIREALRLNEADGRNDSTEKFSYSMSRFLKMAEEELIRIQAQESVALSLVKEITEYFHGNSAKEEAHPFRIFMVVRDFLTVLDGVCKEVGTINERTIVSSAHKFPVPVNPTLPQAFQAHHRVQKYSSSDEE 1005
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1315160 1320176 - Cp4.1LG15g01580.1 Cpe15g00159 481617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00159 1005 MobiDBLite consensus disorder prediction 544 561 - -
Cpe15g00159 1005 Pfam Formin Homology 2 Domain 562 956 IPR015425 -
Cpe15g00159 1005 MobiDBLite consensus disorder prediction 485 508 - -
Cpe15g00159 1005 PANTHER FORMIN-LIKE PROTEIN 1 482 1005 - -
Cpe15g00159 1005 PANTHER FORMIN-LIKE PROTEIN 1 6 379 - -
Cpe15g00159 1005 SUPERFAMILY Formin homology 2 domain (FH2 domain) 492 969 - -
Cpe15g00159 1005 MobiDBLite consensus disorder prediction 433 471 - -
Cpe15g00159 1005 Gene3D Formin, FH2 domain 558 966 IPR042201 -
Cpe15g00159 1005 MobiDBLite consensus disorder prediction 279 322 - -
Cpe15g00159 1005 MobiDBLite consensus disorder prediction 43 67 - -
Cpe15g00159 1005 SMART it6_source 560 971 IPR015425 -
Cpe15g00159 1005 MobiDBLite consensus disorder prediction 208 259 - -
Cpe15g00159 1005 ProSiteProfiles Formin homology-2 (FH2) domain profile. 560 982 IPR015425 -
Cpe15g00159 1005 MobiDBLite consensus disorder prediction 279 359 - -
Cpe15g00159 1005 PANTHER FORMIN-RELATED 482 1005 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Cpe15g00159 1005 PANTHER FORMIN-RELATED 6 379 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Cpe15g00159 1005 Coils Coil 725 752 - -
Cpe15g00159 1005 MobiDBLite consensus disorder prediction 433 571 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g01150 Cpe-Chr5:7799988 Cpe15g00159 Cpe-Chr15:1315160 2.22E-166 dispersed
Cpe05g01457 Cpe-Chr5:10140518 Cpe15g00159 Cpe-Chr15:1315160 4.32E-88 dispersed
Cpe15g00159 Cpe-Chr15:1315160 Cpe18g00055 Cpe-Chr18:1095180 1.00E-114 dispersed
Cpe01g01670 Cpe-Chr1:10453797 Cpe15g00159 Cpe-Chr15:1315160 3.96E-18 transposed
Cpe15g00159 Cpe-Chr15:1315160 Cpe05g00138 Cpe-Chr5:704681 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00159 - - cmos:111464076 1721.83