Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00191 ATGCGTATGGAGCTATTCCCAGCACAGCCAGATTTATCCCTCCAAATTAGCCCTCCAAATACCAATAAACCCTCTTCTTCTTGGATAACAACACCTTCTCAAGAAGAAGTTGATTTGAGGTTTTGGAATAATCTAAGTTTGGAGTCCACTAAATCCACTCCCAAACACCCCCCTCCACCTCCGCCTCCTAATCATCATCTTCATCGTCATCGTCATCATCATCATACCTCCGCTCCCCTTTTCGAAACCCTAAACAAAACCCGACACCGACCCGCCATTTTCCACCACGATACGACATCGCTTCTCAACCCGCCACCACCGCCTCCCCCGCTCCCGTTTCCAGGATTCTTGCAACCCATTAGAGGAATTCCGGTGTACCATCAAACAATTAACCCCTCCGGCATCGGTGTCGATGGTGGCCGAGGCGTTACTCCCTCTACCGTCGACCACCGCCAGATTATGATGCGGTCGAGGTTCTTGTCTAGGTTTCCAGCCAAACGAAGCATGAGAGCCCCACGGATGAGATGGACATCAACTCTTCATGCTCGCTTCGTTCATGCCGTCGAACTTCTCGGCGGCCACGAAAGAGCCACACCGAAGTCGGTTCTCGAGCTTATGGATGTCAAAGATCTAACCTTAGCCCATGTCAAATCTCATTTACAGATGTACAGAACAGTGAAGACTACAGACAGAGCTGCAGCTTCTTCAGGCCAATCAGATTTATATGAAAATGCTTCATCTGGGGACACAAGCAATATTGAAGATATAATATTTGATATTCAAAAGCCAGCCATGGGAAGGCAAAATGAGAGCTTAGTTCATCAAACAACAAGGCAAAACCCTCTTCAAGACAAGGATTATCATGCCCTTTGGAGCAATTCTTCAAGGGAAGCTTGGTTGCATGGTTTGCCAAACGATTCTTCTCGGGACCTTTCTTCGTCCCTCGAGAATGATACGGATCCGAAGTGCTCAAACAACGAGAGACTATCGGAAAGAAGCTCATCGTCAGATGATTGTGGAGGGACGAACTCTCATAAGCCAAATTTAGAATTCACATTAGGAAGGCCAATTTGA 1074 47.3 MRMELFPAQPDLSLQISPPNTNKPSSSWITTPSQEEVDLRFWNNLSLESTKSTPKHPPPPPPPNHHLHRHRHHHHTSAPLFETLNKTRHRPAIFHHDTTSLLNPPPPPPPLPFPGFLQPIRGIPVYHQTINPSGIGVDGGRGVTPSTVDHRQIMMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDLYENASSGDTSNIEDIIFDIQKPAMGRQNESLVHQTTRQNPLQDKDYHALWSNSSREAWLHGLPNDSSRDLSSSLENDTDPKCSNNERLSERSSSSDDCGGTNSHKPNLEFTLGRPI 357
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1569966 1575132 - Cp4.1LG15g01860.1 Cpe15g00191 481649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00191 357 MobiDBLite consensus disorder prediction 13 33 - -
Cpe15g00191 357 MobiDBLite consensus disorder prediction 313 334 - -
Cpe15g00191 357 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 356 IPR044847 GO:0000976|GO:0006355|GO:0010158
Cpe15g00191 357 MobiDBLite consensus disorder prediction 48 77 - -
Cpe15g00191 357 Gene3D - 171 228 - -
Cpe15g00191 357 MobiDBLite consensus disorder prediction 335 349 - -
Cpe15g00191 357 MobiDBLite consensus disorder prediction 1 33 - -
Cpe15g00191 357 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 356 - -
Cpe15g00191 357 MobiDBLite consensus disorder prediction 307 357 - -
Cpe15g00191 357 SUPERFAMILY Homeodomain-like 169 225 IPR009057 -
Cpe15g00191 357 MobiDBLite consensus disorder prediction 62 76 - -
Cpe15g00191 357 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 172 225 IPR006447 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00452 Cpe-Chr7:2891447 Cpe15g00191 Cpe-Chr15:1569966 7.05E-35 dispersed
Cpe09g01102 Cpe-Chr9:9507321 Cpe15g00191 Cpe-Chr15:1569966 2.37E-38 dispersed
Cpe11g00176 Cpe-Chr11:957338 Cpe15g00191 Cpe-Chr15:1569966 4.23E-35 dispersed
Cpe15g00191 Cpe-Chr15:1569966 Cpe20g00167 Cpe-Chr20:945976 4.80E-38 dispersed
Cpe01g01981 Cpe-Chr1:16933603 Cpe15g00191 Cpe-Chr15:1569966 9.23E-31 transposed
Cpe14g00982 Cpe-Chr14:8301898 Cpe15g00191 Cpe-Chr15:1569966 3.05E-08 wgd
Cpe15g00191 Cpe-Chr15:1569966 Cpe05g00160 Cpe-Chr5:852093 2.39E-146 wgd
Cpe15g00191 Cpe-Chr15:1569966 Cpe08g00875 Cpe-Chr8:6906942 2.30E-37 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50593 None None None None Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00191 - - cpep:111811344 664.07