Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00193 ATGACCACAAGATACACAGGTCGCCCAATTGAAGGGATGCCCATGCAACCATCTTTGGATTTGGACATGAATATATACTCGAGGCAATACACGGAGGCCATGGTTTCGTCCTCCGACATGATGTCGATGCCCTCGATGCTCCCGCCCGAGGCTGCCCACTTCTCGAAGGGCGACCTATTAATTGATGAGGAAAAGACACTGGCAATGGACCTGGCTGTGTCGTCCATAGCTGAACTTGTTAAGATGTGTCGCTCGACTGAGCCTCTTTGGGTTCGAGATAGCGAGAGCGGTAAGGACATTCTAAATGTCGAAGAGCATGCCAGGATGTTTCCATGGCCATTGAACCTCAAGCAACACTTGATCAATGAGTTTAGGACCGAAGCCACTCGTGACAGCGCCGTTGTTATAATGAATAGCATAACTCTTGTCGACGCCTTTCTTGATGCCAACAAATGGATGGAATTATTTCCTTCAATTGTGGCCAAAGCAAGAACTATTCAAGTCATTTCATCAAGTGTTTCAGGCCATGCTAGTGGTTCCCTTCAGCTGATGTATGCAGAACTTCAAGCCCTTTCTCCGCTCGTTCCGACGAGAGAAGCTCACTTTCTCCGGTGCTGCCAACAAAACGCCGACGAAGGAAGCTGGGCCATCGTCGATTTCCCGATCGACACCTTTCACGACAGCCTTCAGCACTCGTTTCCGAGATACAGAAGAAAGCCCTCTGGTTGCATTATTCAAGACATGCCCAATGGATACTCTAGGGTTACATGGGTGGAGCATGGAGAGATAGAAGAGAAGCCAATCCATCAAATATTCAATCACTTTGTGCATAGTGGAATGGCTTTTGGGGCACACCGTTGGTTGGCTATCTTACAAAGGCAATGCGAGAGAATTGCAAGCCTCATGGCTAGAAACATCTCTGATCTTGGAGTAATACCTTCACCGGAAGCTAGACAAAACCTAATGAAACTAGCACAAAGAATGATCAGAACTTTCTCCGTCAACATAAGCACCTCCGGTGGCCAGTCATGGACGGCGTTATCTGAATCTCCCGACGATACTGTTCGTATAACCACACGAAAAATCGTCGAGCCTGGCCAACCTAATGGGGTTATTCTCAGCGCCGTCTCGACCACTTGGCTTCCTTATCCTCATTATCGAGTCTTCGATCTTCTTCGAGACGAACGTCGACGGTCTCAGCTCGAGGTTCTTTCGAATGGGAATTCGCTGCACGAAGTTGCTCACATTGCCAATGGCTCTCACCCTGGAAATTGCATCTCTCTTCTTCGTATCAATGTGGCCAGCAACTCGTCCCAGCACGTCGAGCTAATGCTGCAAGAGAGCTGCACGGATCAGTCGGGCAGCCTCGTCGTCTACGCAACGATCGACGTCGATTCAATTCAATTAGCCATGAGTGGAGAAGACCCATCTTGCATTCCTCTCCTCCCCATAGGATTTTCCATTGTCCCCGTCGTCGGGTCTACCGTTGACGGACACCCATCACCACCACCCGAAGACGGTGTCGCTAACTCCGGCTGCCTCCTTACCGTCGGCTTGCAAGTTCTAGCCAGCACTATTCCATCAGCAAAGCTCAACCTATCAAGCGTTACTGCCATCAACAATCACCTATGTAACACGGTGCACCAAATCAACGCCGCTCTCGGCAGCCCGGCTAGTATCGAGAACGGTAATACCATTGCTGAGCCTAATAATGCACCAGCGCCGGCACCGGCACCGGCGCCAGCACCCAAGCAATAA 1758 50.11 MTTRYTGRPIEGMPMQPSLDLDMNIYSRQYTEAMVSSSDMMSMPSMLPPEAAHFSKGDLLIDEEKTLAMDLAVSSIAELVKMCRSTEPLWVRDSESGKDILNVEEHARMFPWPLNLKQHLINEFRTEATRDSAVVIMNSITLVDAFLDANKWMELFPSIVAKARTIQVISSSVSGHASGSLQLMYAELQALSPLVPTREAHFLRCCQQNADEGSWAIVDFPIDTFHDSLQHSFPRYRRKPSGCIIQDMPNGYSRVTWVEHGEIEEKPIHQIFNHFVHSGMAFGAHRWLAILQRQCERIASLMARNISDLGVIPSPEARQNLMKLAQRMIRTFSVNISTSGGQSWTALSESPDDTVRITTRKIVEPGQPNGVILSAVSTTWLPYPHYRVFDLLRDERRRSQLEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNSSQHVELMLQESCTDQSGSLVVYATIDVDSIQLAMSGEDPSCIPLLPIGFSIVPVVGSTVDGHPSPPPEDGVANSGCLLTVGLQVLASTIPSAKLNLSSVTAINNHLCNTVHQINAALGSPASIENGNTIAEPNNAPAPAPAPAPAPKQ 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1602997 1610065 - Cp4.1LG15g01980.1 Cpe15g00193 481651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00193 585 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 15 561 IPR042160 -
Cpe15g00193 585 SUPERFAMILY Bet v1-like 334 551 - -
Cpe15g00193 585 SUPERFAMILY Bet v1-like 62 299 - -
Cpe15g00193 585 CDD START_ArGLABRA2_like 65 296 - -
Cpe15g00193 585 Pfam START domain 72 297 IPR002913 GO:0008289
Cpe15g00193 585 ProSiteProfiles START domain profile. 61 300 IPR002913 GO:0008289
Cpe15g00193 585 SMART START_1 70 297 IPR002913 GO:0008289
Cpe15g00193 585 MobiDBLite consensus disorder prediction 561 585 - -
Cpe15g00193 585 Gene3D - 90 295 IPR023393 -
Cpe15g00193 585 PANTHER - 15 561 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00164 Cpe-Chr5:872972 Cpe15g00193 Cpe-Chr15:1602997 9.97E-10 dispersed
Cpe15g00193 Cpe-Chr15:1602997 Cpe20g00379 Cpe-Chr20:2136801 2.05E-136 dispersed
Cpe15g00193 Cpe-Chr15:1602997 Cpe05g00163 Cpe-Chr5:872077 1.24E-92 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00193 - - csv:101212772 1041.18