Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00214 ATGACAGACTACCGACTGCCGCAGGCGATGAATCTTTGGGCGGATGAGAACGCATCGATGATGGACGTGTTCACAAGCACCGATCTGAGTTCCTTATGGGTTACGCCGCCGCTGCCGCAGCCACAGCCACAGCCACAGCCACAGCCACAGCCGCTTTATTCCTCTGTTTCCACGGCGATTGAACCAAGTAAACCCGTCGGTCAAGAGCCGCCGGCGCCGCCGCCGTCCTTGGCGGTTTTCAACCAGGAGACTCTGATGCAGCGCCTCCAAGTGTTGATTGAAGGCGCTCAAGAGAGCTGGACTTACGCTATCTTCTGGCAATCTTCGTACTACTCTGGTAGTAACCTCTTAGGGTGGGGCGATGGATACTACAAAGGCGAAGAAGATAAAGAGAAAGCTAAATCGAGCACCTCAAAAACAGAGCAAGAGCGCCGGAAGACGGTACTTCGCGAACTCAACTCTCTCATTTCTGGTTCCCCTGCCTCCGATGACGACGCCGTCGACGAGGTCGTCACCGACACCGAGTGGTTCTTCTTGGTGTCGATGACTCAATCGTTCGTCTCCGGTGTCGGATTACCGGGACAAGCGTTTTTAGATTCGAACCCTATTTGGATTAGCGGTTCCGATCGGCTTGCGAGCTCGTTCTGTGAACGAGCTCGTCAGGGTCAGATTTTTGGATTGCAAACAATGGTTTGTATTCCGTTGGTGAACGGCGTTGTTGAATTAGGGTCGAGCGATTTGATTTTCCTGAACTCTGAGCTGATGAATAGGGTTAGGGTTTTGTTTAATTTCAATAATCTGGAGGCGGAGACTTGGCCAATTAGTGGCGAGAATGACCCGTCGCTTTGGATCACTGAGCCATTATCAAACGCCATTGAAATTAAGGGCGCCATTGAAACTCCAAGTTCTTCTGTTCCTCCTCCGCCTCAAAAGAGTAACCGGCAGCCGCAGCCGGTTCAGAAACAGAGCTTCTTAACCCCCAAGGAATTGAACTTCTCTGAATTTGGGTTTGAGAATGGCAGCTTGAAGGCGGAATCCGGGGAGATTCTTAATTTTAGTGGCACCAAGAGGAATTCTCACCCCAACACAGACAACATCTTGCCTTCCAGCAACCTGGGCGGTGGCGGCGGCGGCGGCGGCGATGAGAACAAGAAGAAGACATCCAGTAACGAAGAGGGGATGCTTTCTTTTACATCTGGTGTGATTCTTCCATCCTCTGGCACTGCGAAATCGACCGGTTGCATTGTCGATTCCGATCACTCCGACCTCGAAGCTTCGGTGATACGTGAGGTGGAGAGTAATAGAGCGGTGGAGCCGGAGAAACGGCCGCGAAAACGAGGTCGAAAACCAGCAAATGGTAGAGAAGAACCATTGAATCATGTTGAAGCAGAGAGGCAGAGAAGAGAAAAACTAAACCAAAGATTCTATGCTCTTAGAGCTGTGGTTCCAAATGTATCAAAAATGGACAAAGCTTCACTTCTAGGCGATGCTATTTCTTACATTAACGAGCTCAAAGGGAAGCTTCAAACAGCAGAATCAGATAAGGAGGAGCTACAAAAGCAATTGGATTCAGTGAAGAAGTTCATATCAAGCTCAGATCAAGACGTAAAAGCATCGAATTATGGCATTGAAACCGATATCGACGTGAAGATAATCAGCTGGGACGCAATGATCCGGATCCAATCAAGTAAGAAGAACCATCCCGCTGCACGGCTGATGGCGGCATTGGAGGAACTGGATTTGGATATCAGCCATGCGAGCATTTCAGTTGTGAATGATCTGATGATCCAACAAGCAACTGTGAAGATGGGCAGTCGGTTGTACACTCAGGAGCAGCTCAGGATAGCTCTGTCGTCGAAAATGGCCGCCGCTCGGTAG 1878 49.95 MTDYRLPQAMNLWADENASMMDVFTSTDLSSLWVTPPLPQPQPQPQPQPQPLYSSVSTAIEPSKPVGQEPPAPPPSLAVFNQETLMQRLQVLIEGAQESWTYAIFWQSSYYSGSNLLGWGDGYYKGEEDKEKAKSSTSKTEQERRKTVLRELNSLISGSPASDDDAVDEVVTDTEWFFLVSMTQSFVSGVGLPGQAFLDSNPIWISGSDRLASSFCERARQGQIFGLQTMVCIPLVNGVVELGSSDLIFLNSELMNRVRVLFNFNNLEAETWPISGENDPSLWITEPLSNAIEIKGAIETPSSSVPPPPQKSNRQPQPVQKQSFLTPKELNFSEFGFENGSLKAESGEILNFSGTKRNSHPNTDNILPSSNLGGGGGGGGDENKKKTSSNEEGMLSFTSGVILPSSGTAKSTGCIVDSDHSDLEASVIREVESNRAVEPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELKGKLQTAESDKEELQKQLDSVKKFISSSDQDVKASNYGIETDIDVKIISWDAMIRIQSSKKNHPAARLMAALEELDLDISHASISVVNDLMIQQATVKMGSRLYTQEQLRIALSSKMAAAR 625
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1833374 1835251 + Cp4.1LG15g02130.1 Cpe15g00214 481672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00214 625 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 455 504 IPR011598 GO:0046983
Cpe15g00214 625 Gene3D - 454 532 IPR036638 GO:0046983
Cpe15g00214 625 MobiDBLite consensus disorder prediction 35 55 - -
Cpe15g00214 625 MobiDBLite consensus disorder prediction 426 465 - -
Cpe15g00214 625 MobiDBLite consensus disorder prediction 36 50 - -
Cpe15g00214 625 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 85 262 IPR025610 -
Cpe15g00214 625 CDD bHLH_AtAIB_like 452 527 - -
Cpe15g00214 625 MobiDBLite consensus disorder prediction 353 370 - -
Cpe15g00214 625 Coils Coil 501 528 - -
Cpe15g00214 625 PANTHER TRANSCRIPTION FACTOR MYC2 13 623 - -
Cpe15g00214 625 MobiDBLite consensus disorder prediction 299 325 - -
Cpe15g00214 625 Pfam Helix-loop-helix DNA-binding domain 459 504 IPR011598 GO:0046983
Cpe15g00214 625 PANTHER MYC 13 623 IPR045084 GO:0003700|GO:0006355
Cpe15g00214 625 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 458 531 IPR036638 GO:0046983
Cpe15g00214 625 SMART finulus 461 510 IPR011598 GO:0046983
Cpe15g00214 625 MobiDBLite consensus disorder prediction 353 392 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe14g00960 Cpe15g00214 CCT
Cpe05g00176 Cpe15g00214 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe14g01018 Cpe-Chr14:8600402 Cpe15g00214 Cpe-Chr15:1833374 6.72E-15 dispersed
Cpe15g00064 Cpe-Chr15:445225 Cpe15g00214 Cpe-Chr15:1833374 5.02E-14 dispersed
Cpe19g00712 Cpe-Chr19:5559444 Cpe15g00214 Cpe-Chr15:1833374 7.58E-08 dispersed
Cpe14g00960 Cpe-Chr14:8090753 Cpe15g00214 Cpe-Chr15:1833374 0 wgd
Cpe15g00214 Cpe-Chr15:1833374 Cpe05g00176 Cpe-Chr5:929089 0 wgd
Cpe15g00214 Cpe-Chr15:1833374 Cpe08g00859 Cpe-Chr8:6788078 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50598 PF14215 bHLH-MYC_N 1.00E-51 CL0161 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00214 K13422 - csv:101218165 879.011