Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00220 ATGGCTGGCCTGGATTTAAGCAATCACTATATTCACCAACTTCAAAGGCCTGATTTCAACCACCACCACCACCACCAGCCGCCGCCGCCTCCTCCACCCGATTCTCAATCGTGTCATGACACCGAATCTCATCATCTCGCCACCGATACGGTGGCGTCTCGTCGACCACGCGGTCGTCCACCCGGTTCCAAAAACAGACCAAAGCCACCGGTCATCATAACTCGAGAAAGCGCAAATACCCTAAGAGCTCATATTCTCGAGATCGGCGGTGGCTGCGACGTCTTCGATAGTATCGCTTCTTACGCTCGCCGCCGTCAGCGTGGGATCTGTATCTTGAGTGGCAGCGGAACGGTAACGAATGTCAACTTACGACAACCGACCGCGGCCGGATCTGTGTTAACCCTACAAGGTAGGTTTGAGATATTATCGCTCACTGGATCTTTCTTACCGCCACCGGCTCCTCCCGGCGCCACCAGTTTGACCATATACTTGGCTGGTGGGCAAGGGCAAGTGGTCGGTGGTAACGTCGTTGGAGAATTGATGGCGGCCGGACCAGTGACGGTCATCACCGCTTCGTTTACGAATGTAGCATACGAGAGATTGCCACTGGAAGACGAAGAACAAGAACAAGAACAAGAACAAGATCAGATTCAGATGCAACCACCGACATCGCACGGAAACAATAACCCATTTCCAGATCCATCTTCAGGGCTTCAGTTCTTCAATTTGCCTGTAAATATGCAGAATCAAATTCAGCTACCATTCTGA 768 51.82 MAGLDLSNHYIHQLQRPDFNHHHHHQPPPPPPPDSQSCHDTESHHLATDTVASRRPRGRPPGSKNRPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRGICILSGSGTVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPPPAPPGATSLTIYLAGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLEDEEQEQEQEQDQIQMQPPTSHGNNNPFPDPSSGLQFFNLPVNMQNQIQLPF 255
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1903902 1904669 - Cp4.1LG15g02220.1 Cpe15g00220 481678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00220 255 ProSiteProfiles PPC domain profile profile. 78 216 IPR005175 -
Cpe15g00220 255 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 13 254 IPR014476 GO:0003680
Cpe15g00220 255 MobiDBLite consensus disorder prediction 204 239 - -
Cpe15g00220 255 MobiDBLite consensus disorder prediction 214 239 - -
Cpe15g00220 255 MobiDBLite consensus disorder prediction 19 72 - -
Cpe15g00220 255 Gene3D - 81 215 - -
Cpe15g00220 255 SUPERFAMILY AF0104/ALDC/Ptd012-like 78 207 - -
Cpe15g00220 255 MobiDBLite consensus disorder prediction 38 52 - -
Cpe15g00220 255 PIRSF ESCAROLA 4 253 IPR014476 GO:0003680
Cpe15g00220 255 Pfam Plants and Prokaryotes Conserved (PCC) domain 82 195 IPR005175 -
Cpe15g00220 255 CDD DUF296 82 165 IPR005175 -
Cpe15g00220 255 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 13 254 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe14g00955 Cpe15g00220 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01656 Cpe-Chr3:12655423 Cpe15g00220 Cpe-Chr15:1903902 1.58E-90 dispersed
Cpe12g00049 Cpe-Chr12:266568 Cpe15g00220 Cpe-Chr15:1903902 6.70E-89 dispersed
Cpe15g00220 Cpe-Chr15:1903902 Cpe17g00291 Cpe-Chr17:1974212 4.04E-90 dispersed
Cpe14g00955 Cpe-Chr14:8063080 Cpe15g00220 Cpe-Chr15:1903902 1.93E-92 wgd
Cpe15g00220 Cpe-Chr15:1903902 Cpe05g00183 Cpe-Chr5:963252 7.54E-119 wgd
Cpe15g00220 Cpe-Chr15:1903902 Cpe08g00854 Cpe-Chr8:6759896 1.36E-86 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00220 - - cmo:103503535 357.451