Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00228 ATGTTACATATTGACCAGTTATTGATAGAAGCAAAACATCGTTGGTTACGTCCAGCTGAAATTTGTGAAATACTCCGTAACTATCCTAAGTTTCAAATTGCTTCAGAGCCTCCAGATAGACCTTCAAGTGGGTCACTTTTTCTCTTTGATCGAAAGGTTCTGAGGTACTTTAGAAAGGATGGACATAAATGGAGGAAGAAGAAAGATGGCAAAACAGTAAGAGAAGCACATGAGAAGCTGAAGGTTGGAAGCATTGATGTATTGCACTGCTATTATGCCCATGGAGAAGAAAATGAGAACTTTCAAAGGCGCAGTTATTGGATGCTTGAAGAGCATTTAATGCACATCGTTTTTGTCCACTACTTGGAAGTTAAGGGTAATAGAACCAATATTGGAGCTGTCGTTGAGACTGATGAGGTTTCATCAAGTTCACAGAAGAGCAGCCCTACGAGTGCTAGCTATTCCAGCAGTTATAATCAAGCAGCTTCTGAAAATGCAGATTCCCCCAGTCCAACTAGCCCTTTGACACCATTTTGTGAAGATGGTGATACGGAAGACACCGGCCAAGCAACTTCAAGATTTCGCTCATTTCCCACGTCACCAAAAATGGGAAATGGTCTTCTGATGAATAAACAAGATGCTGACACATCAGTTCCTGCTGTGGATTATGTATCACAAGTTCAGAAAGATGTACTTGGGGGTAACATTTGTGGTACCAATGTGACGGATTCTCAGAAGACGCTCAGTTCTGCCTCGTGGGAAGAGATCTTGCAACATTGTACAACTGGATTTCAGACTGTACCTTCTCATGTTTTATCCTCTTTGATTGAACCTGTTTCTTCTGGAATTGTCGTTGGACAAGAGAATTCAATTCCTGGCCAGCCTTCAACCAGTAATAGTGCTATTACAGAGGATTTTGGGAGTTCTCTGACAATGAACTCAAACTGGCAGGTTTCTTTTGAAGACAATACTTCGTCCTTTTCAAAAGAGTACGTTGACCAGTTTCCAGAATTGTATTCAGTTTATGACATAGATAGCAGGTTAACTGAGCAGAATTCTCATAATGCAACTTTTGGAAGTGGTCGTGAGATGTCTTGTGCTCATCCTGGCATAGAGAATGAGGAGATTTTGCCAAACAACCTTGAATTACAGGTCAAAGAAGGAGAATCGTATTCTGCTATGAGGTTGAGTTCTGAAAATGATAAATCTAAAGAAGGTACCGTTGGCTATTCTTTGAGTTTGAAACAATCATTAATAGACGGAGAGGAGAGTTTAAAGAAAGTTGACAGCTTCTCGAGGTGGGTATCCAGAGAGCTTGTCGAAGTTGATGATTTGCACATGCATCCATCATCTGGCTTGTCTTGGAGCACCGTAGAATGTGGTGATATGGTAGATAATTCATCATTAACCCCTTCTCTTTCTGAAGACCAGCTTTTCAGTATAACAGAATTTTCTCCAAAGTGGACACTTGCAGATTTGGAAACTGAGGTTGTGATTATAGGGAAGTTTCTGGGGAACAATCATGGCACAAAATGTTATTGGTCATGTATGTTTGGGGAAGTCGAAGTTCCTGCAGAGGTTTTGGCTGATGGGATCCTATGCTGCCATGCACCACCACATAGTGTTGGGCAAGTCCCTTTTTATGTCACATGTTCCAACAGATTAGCATGCAGTGAGATTCGTGAGTTTGATTACTTGGCAGGCTCTGCTCAAGATGTCGATGTTACCGAAGTATATACTGCTGGTGCTACAGAGGAATTATATTTGCATATGCGATTGGAGAGGTTACTGTCCCATAGATCTTCAAATCCTCCAAATAATCTCTCTGAAGGTGCTTTGGCGAAACGGAACTTAATCAGAGAGCTTATCTCAATAAAAGAAGAAGAAGATTGTTATGGGGAGGAGCCAAATTCTCATAATGTTCAAATTCAGCATCAAAACAAGGAGTTTCTTTTTGTAAAGCTGATGAAAGAAAAAGTGTACTCATGGCTTATCCGCAAAGTCATTGAAGGTGGCAAAGGTCCTCATATATTGGATGATGAGGGACAGGGGTTAATTCATTTAGCAGCAGCCCTCGGTTATGATTGGGCAATCCGACCAATTGTCGCTGCAGGAGTGAGCATAAACTTCCGAGACGTTAATGGATGGACTGCTCTCCATTGGGCAGCATTCTGTGGCAGGGAGTTGACAGTTGGAACCCTTATAACATTGAATGCTGCTCCTGGATTGCCGGCTGATCCTTCTCCAAAAAATCCTTTGGGGATATCGCCATCTGAGCTTGCATCGATGAGTGGGCACAAAGGGATTGCTGGTTTCCTTGCAGAGTCATCATTGACCAGCTATATCGAATCCATATCAATGGGGGAGACCGTAAAAGATGGTGTGCTGGATGTTTCAAAGAGGAAACCTGTGCATACTATTTCTGAACGAAGGGCAACACCGATAAGTGATGGTTTTATGCCTGCTGATTTGTCCTTGAAGGATTCATTGACTGCTGTCTGCAATGCTACTCAAGCTGCTGGGCGTATACATCTGATGTTTAGAATGCAGTCATTTCAGAGGAAAAAATTATCGGAGTGTAGTCCTGATGAACTTGGATCCTCAGATGATACTGCTATTTCATTTGCCAAAGCCAGGGCACGTAAGTCTGGACTAAGTAACAGCCCGGCCCATGCCGCTGCAGTTCACATACAGAAAAAGTTCCGTGGTTGGAGAATGAGAAAAGAGTTCTTGCTAATACGTCAAAGAATAGTGAAAATTCAGGCCCACGTGAGAGGACACCAGGTGAGGAAGCAATATAAAAAGATCGTCTGGTCCGTAGGCATATTAGACAAGATTATTTTGAGATGGAGACGGAAGGGGAGTGGTTTGCGAGGTTTCCGATCAGATGCAGCTGCGAAGAATCCATCCGCCGTGATGGAACCACCTAAAGAGGATGATTATGATTTTCTGGCGAAAGGAAGGAAGCAGACTGAGGAAAGATTTCAAAAAGCACTGACTAGAGTCAAGTCCATGGCTCAGTATCCCGAGGGACGAGACCAATACCGTAGGCTTCTTACCGTCGTTCAAAAGTGCCAAGAAACCAAGGCAAGTAATATGGCTATTACTAGCACTAGAGAAGAGATAATAGAAGGCGATGACATGATTGATATCGACTCACTTCTGGACGACGACGCTTTGATGTCTATGACATTTGATTGA 3201 42.64 MLHIDQLLIEAKHRWLRPAEICEILRNYPKFQIASEPPDRPSSGSLFLFDRKVLRYFRKDGHKWRKKKDGKTVREAHEKLKVGSIDVLHCYYAHGEENENFQRRSYWMLEEHLMHIVFVHYLEVKGNRTNIGAVVETDEVSSSSQKSSPTSASYSSSYNQAASENADSPSPTSPLTPFCEDGDTEDTGQATSRFRSFPTSPKMGNGLLMNKQDADTSVPAVDYVSQVQKDVLGGNICGTNVTDSQKTLSSASWEEILQHCTTGFQTVPSHVLSSLIEPVSSGIVVGQENSIPGQPSTSNSAITEDFGSSLTMNSNWQVSFEDNTSSFSKEYVDQFPELYSVYDIDSRLTEQNSHNATFGSGREMSCAHPGIENEEILPNNLELQVKEGESYSAMRLSSENDKSKEGTVGYSLSLKQSLIDGEESLKKVDSFSRWVSRELVEVDDLHMHPSSGLSWSTVECGDMVDNSSLTPSLSEDQLFSITEFSPKWTLADLETEVVIIGKFLGNNHGTKCYWSCMFGEVEVPAEVLADGILCCHAPPHSVGQVPFYVTCSNRLACSEIREFDYLAGSAQDVDVTEVYTAGATEELYLHMRLERLLSHRSSNPPNNLSEGALAKRNLIRELISIKEEEDCYGEEPNSHNVQIQHQNKEFLFVKLMKEKVYSWLIRKVIEGGKGPHILDDEGQGLIHLAAALGYDWAIRPIVAAGVSINFRDVNGWTALHWAAFCGRELTVGTLITLNAAPGLPADPSPKNPLGISPSELASMSGHKGIAGFLAESSLTSYIESISMGETVKDGVLDVSKRKPVHTISERRATPISDGFMPADLSLKDSLTAVCNATQAAGRIHLMFRMQSFQRKKLSECSPDELGSSDDTAISFAKARARKSGLSNSPAHAAAVHIQKKFRGWRMRKEFLLIRQRIVKIQAHVRGHQVRKQYKKIVWSVGILDKIILRWRRKGSGLRGFRSDAAAKNPSAVMEPPKEDDYDFLAKGRKQTEERFQKALTRVKSMAQYPEGRDQYRRLLTVVQKCQETKASNMAITSTREEIIEGDDMIDIDSLLDDDALMSMTFD 1066
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2067654 2082035 - Cp4.1LG15g02270.1 Cpe15g00228 481686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00228 1066 MobiDBLite consensus disorder prediction 189 210 - -
Cpe15g00228 1066 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 3 1066 - -
Cpe15g00228 1066 SMART iq_5 912 934 IPR000048 GO:0005515
Cpe15g00228 1066 SMART iq_5 889 911 IPR000048 GO:0005515
Cpe15g00228 1066 ProSiteProfiles IQ motif profile. 890 919 IPR000048 GO:0005515
Cpe15g00228 1066 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 890 940 IPR027417 -
Cpe15g00228 1066 MobiDBLite consensus disorder prediction 136 177 - -
Cpe15g00228 1066 ProSiteProfiles IQ motif profile. 913 937 IPR000048 GO:0005515
Cpe15g00228 1066 Pfam IPT/TIG domain 480 559 IPR002909 -
Cpe15g00228 1066 Gene3D - 645 815 IPR036770 -
Cpe15g00228 1066 Gene3D - 890 937 - -
Cpe15g00228 1066 CDD IPT 480 566 - -
Cpe15g00228 1066 SUPERFAMILY Ankyrin repeat 665 775 IPR036770 -
Cpe15g00228 1066 Pfam CG-1 domain 10 123 IPR005559 GO:0003677
Cpe15g00228 1066 Gene3D Immunoglobulins 474 569 IPR013783 -
Cpe15g00228 1066 Pfam IQ calmodulin-binding motif 915 934 IPR000048 GO:0005515
Cpe15g00228 1066 Pfam IQ calmodulin-binding motif 891 910 IPR000048 GO:0005515
Cpe15g00228 1066 MobiDBLite consensus disorder prediction 136 210 - -
Cpe15g00228 1066 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 3 1066 - -
Cpe15g00228 1066 SMART CG_1_2 7 125 IPR005559 GO:0003677
Cpe15g00228 1066 ProSiteProfiles CG-1 DNA-binding domain profile. 4 130 IPR005559 GO:0003677
Cpe15g00228 1066 SUPERFAMILY E set domains 481 565 IPR014756 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe15g00228 Cpe-Chr15:2067654 Cpe17g01072 Cpe-Chr17:8150984 1.90E-12 dispersed
Cpe03g01309 Cpe-Chr3:10599106 Cpe15g00228 Cpe-Chr15:2067654 4.91E-60 transposed
Cpe14g00612 Cpe-Chr14:3876868 Cpe15g00228 Cpe-Chr15:2067654 1.86E-60 transposed
Cpe15g00228 Cpe-Chr15:2067654 Cpe04g00378 Cpe-Chr4:4432433 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50600 PF03859 CG-1 8.70E-51 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00228 K21596 - csv:101203707 1715.28