Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00237 ATGCTCGTTCTCGCTATCTCGATAGCGGTTGTGCTACTCACCTTCACGACCCCGGTCGTGCATGGCCAAGGCACTCGCTTAGGTTTCTACTCCAACTCTTGCCCTCAAGCCGAGTCCATCGTTGCATCTACCACAAGTGGATTGCGTTGGGGTGTGCCCACAGGACGAAGGGATGGCACGGTTTCAGTGGCTTCAGAAGCTAACGATTTACCTGGATTTACTGACTCCATTGATGTTCAAAAGAAGAAATTCAGCGATAAGGGTCTCAACACTCAAGATCTTGTTACTCTCGTGGGTGGACACACAATTGGCACCACACAATGCCAGTTTTTCAGCTACAGGCTTTTCAACTTCACTTCAAACGGTCCAGATTCAAGCATCGACCCAGCATTCGTGAGCCAATTGCAAGCCCTTTGCCCTCAGAACGGCGACGGCAGCCGCAGGGTTGGGTTGGACAATGGCAGCCCCAACAGGTTCGACACATCCTTCTTCTCAAACTTAAGGAATGGACGTGGGATCTTGGAGTCCGATCAAAAGCTATGGACTGATGCCTCCACTCGCACTTTTGTGCAACGCTTTCTGGGTCTGAGAGGGCTGTTGGGTTTGACCTTCAACGCTGAGTTTGGGAAATCCATGGTTAAGATGGGTAATATTGAAGTTAAAACTGGTACTCAGGGAGAGATTCGTAAAGTTTGTTCTGTAGTTAACTAA 711 49.23 MLVLAISIAVVLLTFTTPVVHGQGTRLGFYSNSCPQAESIVASTTSGLRWGVPTGRRDGTVSVASEANDLPGFTDSIDVQKKKFSDKGLNTQDLVTLVGGHTIGTTQCQFFSYRLFNFTSNGPDSSIDPAFVSQLQALCPQNGDGSRRVGLDNGSPNRFDTSFFSNLRNGRGILESDQKLWTDASTRTFVQRFLGLRGLLGLTFNAEFGKSMVKMGNIEVKTGTQGEIRKVCSVVN 236
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2149628 2152741 - Cp4.1LG15g02380.1 Cpe15g00237 481695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00237 236 ProSitePatterns Peroxidases proximal heme-ligand signature. 93 103 IPR019793 -
Cpe15g00237 236 ProSiteProfiles Plant heme peroxidase family profile. 38 236 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe15g00237 236 Pfam Peroxidase 43 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe15g00237 236 PANTHER PEROXIDASE 25-RELATED 10 45 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe15g00237 236 SUPERFAMILY Heme-dependent peroxidases 43 236 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cpe15g00237 236 PANTHER PEROXIDASE 45 234 - -
Cpe15g00237 236 PANTHER PEROXIDASE 25-RELATED 45 234 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe15g00237 236 PRINTS Plant peroxidase signature 166 183 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe15g00237 236 PRINTS Plant peroxidase signature 150 165 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe15g00237 236 PRINTS Plant peroxidase signature 46 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe15g00237 236 PRINTS Plant peroxidase signature 92 104 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe15g00237 236 PRINTS Plant peroxidase signature 210 223 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe15g00237 236 PRINTS Haem peroxidase superfamily signature 152 167 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe15g00237 236 PRINTS Haem peroxidase superfamily signature 93 108 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe15g00237 236 PRINTS Haem peroxidase superfamily signature 46 58 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe15g00237 236 Gene3D Peroxidase, domain 2 71 215 - -
Cpe15g00237 236 PANTHER PEROXIDASE 10 45 - -
Cpe15g00237 236 Gene3D - 45 236 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe15g00237 Cpe-Chr15:2149628 Cpe15g00249 Cpe-Chr15:2304143 3.13E-57 dispersed
Cpe15g00236 Cpe-Chr15:2140840 Cpe15g00237 Cpe-Chr15:2149628 3.70E-08 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00237 K00430 - csv:101217567 331.643