Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00240 ATGAGCGGGCGGATCGTGAGCCAAGAGGATCCGGTGCAGTCGGAGCGGCACAGCGAGGCGGGCAGCGTTGCACCGCCTTCGAAGGTGGGCGTGCCGCCGAGGAAGAACGCGTGGGAGGACTTTAAATCTGTGGTGAATGAGACTTTCTTCTCCGATCAGCCTCTTAGGCATTTCAAGGACCAGCCCAAGCGCAAGAAAGTTGCTCTCTTTGTGCAAGGCCTCTTCCCTGTGTTCCAATGGGGACGGGGATATAACTTTAGTAAGTTCAAAGGGGACCTCATTGCTGGCTTAACCATTGCTAGTCTTTGTATTCCTCAGGATATTGGATATGCCAAGCTTGCCAATTTGCCAGCTGAAAATGGACTTTATAGTAGCTTTGTCCCACCATTGGTCTACGCCGTGATGGGAAGTTCTAGAGACATCGCAATCGGCCCGGTCGCCGTCGTGTCACTTTTACTTGGAACACTCCTATCGCAGGTATACGACCCGGTGAAAGAAGCCGAAGAATACAAACGGCTAGCTTTCACGGCAACTTTCTTCGCCGGAGTAACTCAGCTAGCTCTAGGCTTCCTCCGGCTAGGATTCTTGATCGACTTTCTATCACATGCTGCGATTGTTGGGTTCATGGGTGGCGCCGCTGTCACCATCGCCCTTCAACAGCTGAAAGGTCTTCTCGGCATAAAAAACTTCACCAAGAAAACTGATATCATTTCAGTGATGCGCTCAGTTTGGAGTAATTTGCAGCATGGGGGCAAGAAGCATAAGAAACTGTTTTGGATACCTGCCATTGCGCCCTTGACATCGGTGATACTCTCAACTTTTTTTGTGTATATCACTCGAGCTGATAAAGATGGAGTTCAGATTGTAAAACACATAGACAAAGGAATAAATCCACCATCCCTTGATAAGATCTTCTTCCATGGAGACAATCTCACCAAAGGTTTCAAAATTGGAGTGGTTGCTGGTTTGATTGCCCTAACGGAAGCTGTGGCCATTGCAAGAACATTCGCAGACTTAAAGGACTACGAGATCAATGGTAACAAAGAAATGATGGCTCTTGGCACCATGAACATTGCTGGCTCCATGACTTCTTGCTATGTAGCCACAGGATCATTCTCCCGGTCGGCCGTGAACTACATGGCTGGCTGCAGCACACCGATGTCGAACATCGTCATGGCATGTGTCGTTCTCTTGACCTTAGAGCTCATCACACCCCTTTTCAAGTATACCCCTAATGCCATTCTCGCCTCCATCATCATTTGCGCCGTGATTGGGCTCATCGACATCGATGCTGTGATGTTGCTATGGAAGATCGACAAATTCGACTTCATTGCTTGCATGGGAGCTTTCTTTGGCGTCGTCTTTGATTCGGTCGAGATTGGTCTTCTCATTGCTGTGAGTTTGTCGCTGTTTAAAATTCTATTGCAAGTGACGAGACCTCGCATTGCTTTGCTTGGGAAGCTCCCAAAGATTGCCATTTTTAGAAACATTTTGCAATACCCTGGGGCAAAGAGGATTGATGGAATCCTCATGGTTAGGGTTGATTCTTCTATATACTTCTCCAATGCCAACTATGTCAAAGAAAGGATACTGAGATGGCTAGCAGATGAAACAGAGAAGCTCAAAGACCAATCTCTCCCCATCAAAGTCGTTGTCATCGACATGTCTCCGGTATCCGATATCGACACGAGCGGCATCCATGCGATCGAGGGATTGTACTCTCATTTGCAGAAGAAGGAAATTGAGCTTGCACTTGCAAATCCAGGTCCAGTGATAATGGAGAAGCTCTTAGCTGCAAACTTCGACAAGCTCATTGGAGAAGAAAACATTTTCCTTAGTGTCAACGAAGCTATTAAGACTTATGCCCCAAATGCGGCTCTTGATCCTTAA 1890 47.35 MSGRIVSQEDPVQSERHSEAGSVAPPSKVGVPPRKNAWEDFKSVVNETFFSDQPLRHFKDQPKRKKVALFVQGLFPVFQWGRGYNFSKFKGDLIAGLTIASLCIPQDIGYAKLANLPAENGLYSSFVPPLVYAVMGSSRDIAIGPVAVVSLLLGTLLSQVYDPVKEAEEYKRLAFTATFFAGVTQLALGFLRLGFLIDFLSHAAIVGFMGGAAVTIALQQLKGLLGIKNFTKKTDIISVMRSVWSNLQHGGKKHKKLFWIPAIAPLTSVILSTFFVYITRADKDGVQIVKHIDKGINPPSLDKIFFHGDNLTKGFKIGVVAGLIALTEAVAIARTFADLKDYEINGNKEMMALGTMNIAGSMTSCYVATGSFSRSAVNYMAGCSTPMSNIVMACVVLLTLELITPLFKYTPNAILASIIICAVIGLIDIDAVMLLWKIDKFDFIACMGAFFGVVFDSVEIGLLIAVSLSLFKILLQVTRPRIALLGKLPKIAIFRNILQYPGAKRIDGILMVRVDSSIYFSNANYVKERILRWLADETEKLKDQSLPIKVVVIDMSPVSDIDTSGIHAIEGLYSHLQKKEIELALANPGPVIMEKLLAANFDKLIGEENIFLSVNEAIKTYAPNAALDP 629
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2196356 2202068 - Cp4.1LG15g02420.1 Cpe15g00240 481698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00240 629 PANTHER SULFATE TRANSPORTER 1.2-LIKE 20 628 - -
Cpe15g00240 629 CDD STAS_SulP_like_sulfate_transporter 500 614 - -
Cpe15g00240 629 PANTHER SULFATE TRANSPORTER 20 628 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cpe15g00240 629 ProSiteProfiles STAS domain profile. 499 621 IPR002645 -
Cpe15g00240 629 Pfam Sulfate permease family 252 447 IPR011547 GO:0016021
Cpe15g00240 629 Pfam Sulfate permease family 89 249 IPR011547 GO:0016021
Cpe15g00240 629 MobiDBLite consensus disorder prediction 1 33 - -
Cpe15g00240 629 SUPERFAMILY SpoIIaa-like 504 620 IPR036513 -
Cpe15g00240 629 TIGRFAM sulP: sulfate permease 252 617 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cpe15g00240 629 Pfam STAS domain 500 617 IPR002645 -
Cpe15g00240 629 Gene3D STAS domain 494 624 IPR036513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02010 Cpe-Chr1:17123361 Cpe15g00240 Cpe-Chr15:2196356 0 dispersed
Cpe02g00526 Cpe-Chr2:3113853 Cpe15g00240 Cpe-Chr15:2196356 0 dispersed
Cpe03g01459 Cpe-Chr3:11624141 Cpe15g00240 Cpe-Chr15:2196356 1.03E-125 dispersed
Cpe14g00581 Cpe-Chr14:3688915 Cpe15g00240 Cpe-Chr15:2196356 0 dispersed
Cpe15g00240 Cpe-Chr15:2196356 Cpe17g00570 Cpe-Chr17:4661197 0 dispersed
Cpe15g00240 Cpe-Chr15:2196356 Cpe13g00577 Cpe-Chr13:5683783 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00240 K17470 - csv:101202746 1108.98