Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00276 ATGGCTTCCTTCCATGCAGAAGCTTCTGAGTCTAGCAATGTTGATTACACTCAACGAGCTCAGTGGCTCCGAGCCGCAGTTCTCGGAGCCAACGACGGGCTCGTCTCTGTTGCATCGCTGATGATGGGCGTCGGTGCTGTGAAGCCCGACGCCAAAGCCATGCTTATTGCTGGATTTGCGGGGATGGTAGCGGGCGCTTGTAGTATGGCGATCGGAGAGTTCGTGTCGGTTTACACGCAATATGATATACAGAAAGCTCAGCTGAAGAGAGATAGGAAGCAAAAGAATGACATGCAGTCAAGCCACTCGGCCGAGGAGGAAGAGAAGCTACCGAATCCATTACAGGCTGCGCTCGCATCGGCGATAGCGTTTACGGTCGGAGCGGTTATTCCGTTGCTGTCGGCAGTGTTTATACGAGACCATAAGGTAAGGCTCGGGGTGGTTGCAGCGGTGGCGAGCTTGACGTTGGTGGTTTTCGGAGGAGTTGGAGCCGTCCTAGGGAGGACTCCGGTGGGGAAATCGGCGGCGAGAGTGGTTGTTGGAGGGTGGATGGCAATGGGCATCACTTTTGGGCTTACAAAGCTGCTCGGATCGAAGGGGCTGTGA 606 55.28 MASFHAEASESSNVDYTQRAQWLRAAVLGANDGLVSVASLMMGVGAVKPDAKAMLIAGFAGMVAGACSMAIGEFVSVYTQYDIQKAQLKRDRKQKNDMQSSHSAEEEEKLPNPLQAALASAIAFTVGAVIPLLSAVFIRDHKVRLGVVAAVASLTLVVFGGVGAVLGRTPVGKSAARVVVGGWMAMGITFGLTKLLGSKGL 201
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2926380 2926985 + Cp4.1LG15g02750.1 Cpe15g00276 481734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00276 201 Pfam VIT family 101 193 IPR008217 GO:0005384|GO:0030026
Cpe15g00276 201 Pfam VIT family 23 102 IPR008217 GO:0005384|GO:0030026
Cpe15g00276 201 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 8 198 IPR008217 GO:0005384|GO:0030026
Cpe15g00276 201 MobiDBLite consensus disorder prediction 89 109 - -
Cpe15g00276 201 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 8 198 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe13g00679 Cpe-Chr13:6371430 Cpe15g00276 Cpe-Chr15:2926380 2.82E-87 dispersed
Cpe15g00276 Cpe-Chr15:2926380 Cpe01g02114 Cpe-Chr1:17887464 3.50E-88 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00276 K22736 - csv:101214875 323.553