Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00303 ATGGAGATCTCAGTTAAATGTCCCATTTTTGGCTGCCTCTTGCTCGTGCTCTTGCCTATGCTATGCTCCTCTCAAGACAACTTTGTATACTCTAGAGCCACTTATTATGGCAGCCCTGATTGCTATGGGACACCATCTGGGGCTTGTGGATTTGGTGACTTTGGAAGGACTGTGAATGATGGCAATGTTGCTGCCGTTTCTTATCTCTATAGGAATGGTTCTGGTTGTGGTGCATGCTACCAGGTTAGGTGCACTAATCCAACATATTGTAGTGATAGTGGAGCCTATGTAGTGGTGACTGACCATGGTGAAGGGGATTACACTGACTTTATCTTGAGCCCACGAGCCTTTGCAAAATTGGCTCATCCAAACACAGCCTTTGAATTGTTCTCTTATGGTGTGGTTGATGTACAATTCAGAAGGGTTTCATGCCAATACCCTAATTACAACACGGTCAAGTTCAAGGTTCATGAGCATAGTAGGTACCCGGACTACTTGGCGATCGTCATCATTTATGTCGGTGGCCAAAACGATATCACCGTCGTTGAATTGTGGCAGGAGGATTGCAATGAATGGAAGGGGATGAGGAGATCCCATGGAGCTGTTTGGGACATGGCAAACCCACCTAAAGGAGACATAAAATTGAGGTTTCAAGTGAGTGGAAGTGTGGGATATGGAAGGTGGGTGATGGTAACCAATGCTCTCCCAAGCTATTGGAAGGCAGGAGTTGATTACGATACTAACATTCACCTCTATTAA 759 45.32 MEISVKCPIFGCLLLVLLPMLCSSQDNFVYSRATYYGSPDCYGTPSGACGFGDFGRTVNDGNVAAVSYLYRNGSGCGACYQVRCTNPTYCSDSGAYVVVTDHGEGDYTDFILSPRAFAKLAHPNTAFELFSYGVVDVQFRRVSCQYPNYNTVKFKVHEHSRYPDYLAIVIIYVGGQNDITVVELWQEDCNEWKGMRRSHGAVWDMANPPKGDIKLRFQVSGSVGYGRWVMVTNALPSYWKAGVDYDTNIHLY 252
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 3907263 3909029 + Cp4.1LG15g03040.1 Cpe15g00303 481761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00303 252 SUPERFAMILY Barwin-like endoglucanases 14 148 IPR036908 -
Cpe15g00303 252 PRINTS Expansin/Lol pI family signature 27 42 IPR007118 GO:0005576
Cpe15g00303 252 PRINTS Expansin/Lol pI family signature 66 84 IPR007118 GO:0005576
Cpe15g00303 252 PRINTS Expansin/Lol pI family signature 132 148 IPR007118 GO:0005576
Cpe15g00303 252 PRINTS Expansin/Lol pI family signature 192 206 IPR007118 GO:0005576
Cpe15g00303 252 PRINTS Expansin/Lol pI family signature 233 247 IPR007118 GO:0005576
Cpe15g00303 252 PANTHER EXPANSIN-LIKE B1 13 251 - -
Cpe15g00303 252 Gene3D - 145 248 IPR036749 -
Cpe15g00303 252 Pfam Expansin C-terminal domain 152 236 IPR007117 -
Cpe15g00303 252 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 46 149 IPR007112 -
Cpe15g00303 252 PANTHER EXPANSIN-B3 13 251 - -
Cpe15g00303 252 SUPERFAMILY PHL pollen allergen 151 246 IPR036749 -
Cpe15g00303 252 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 164 247 IPR007117 -
Cpe15g00303 252 Gene3D - 20 144 IPR036908 -
Cpe15g00303 252 Pfam Lytic transglycolase 66 139 IPR009009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe15g00303 Cpe-Chr15:3907263 Cpe15g00630 Cpe-Chr15:7023144 1.26E-48 dispersed
Cpe15g00303 Cpe-Chr15:3907263 Cpe05g00221 Cpe-Chr5:1245754 3.58E-152 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00303 - - csv:101215548 456.832