Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe15g00317 | ATGGGGCTACCGGTGAAGGCTTTTCCGTTCACTGTGGTGAGTCATGTACTGGCAATCGTGGCGCTGATTCTTGTCCTGGTTTGGGCCGTTCACTTCAGAGGCGGCCTGGCTTGGGAGGCCGTCAATAAGAACCTTATCTTCAACATTCATCCGGTTCTTATGCTACTCGGGTTGATCATCATAGGAGGGGAAGCAATAATTAGTTATAAATCACTACCATTGAGAAAAGAAGTAAAAAAGGTGATCCATTTGGTGCTACACGGCGTCGCTTTGGCACTGGGCATCGTGGGAATCTGGGCAGCATTCAAAAACCATAATGAAAGCGGGATCCCTAATCTTTACAGCTTGCATTCCTGGATTGGAATTGGCGTAATTGCCCTGTATGGTGTCCAGTGGGTGTACGGACTGGTGACATTCTTCTACCCTGGCGGGTCGGCGGATCTCCGAAGAGCATCACTTCCATGGCATGTGGTTGTGGGTATCAGTGTGTACATATTGGCTGTGGGGAACTCGGCGCTGGGGTTCTTAGAGAAGCTGACGTTTCTGGAGAGCGGGGGGGTGGACAAATACGGGAGTGAGGCGTTTCTTGTGAACTTCACTGCTATTATCACTATAGTATTTGGAGCCTCTGTGCTTTTGAGTGTTGCTTCACACCACTCCGTTCAAGAACACGACGCTGATGCCTATACTGCTATATGA | 699 | 49.36 | MGLPVKAFPFTVVSHVLAIVALILVLVWAVHFRGGLAWEAVNKNLIFNIHPVLMLLGLIIIGGEAIISYKSLPLRKEVKKVIHLVLHGVALALGIVGIWAAFKNHNESGIPNLYSLHSWIGIGVIALYGVQWVYGLVTFFYPGGSADLRRASLPWHVVVGISVYILAVGNSALGFLEKLTFLESGGVDKYGSEAFLVNFTAIITIVFGASVLLSVASHHSVQEHDADAYTAI | 232 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 15 | 4141089 | 4143424 | + | Cp4.1LG15g03170.1 | Cpe15g00317 | 481775 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe15g00317 | 232 | SMART | 561_7 | 49 | 175 | IPR006593 | - | |
| Cpe15g00317 | 232 | Pfam | Eukaryotic cytochrome b561 | 49 | 181 | IPR006593 | - | |
| Cpe15g00317 | 232 | Gene3D | - | 3 | 225 | - | - | |
| Cpe15g00317 | 232 | PANTHER | CYTOCHROME B561-RELATED | 1 | 232 | IPR043205 | GO:0016491 | |
| Cpe15g00317 | 232 | CDD | Cyt_b561_ACYB-1_like | 42 | 183 | - | - | |
| Cpe15g00317 | 232 | ProSiteProfiles | Cytochrome b561 domain profile. | 13 | 216 | IPR006593 | - | |
| Cpe15g00317 | 232 | PANTHER | TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 1 | 1 | 232 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe01g01859 | Cpe-Chr1:15921380 | Cpe15g00317 | Cpe-Chr15:4141089 | 2.73E-39 | dispersed | |
| Cpe01g02464 | Cpe-Chr1:20393378 | Cpe15g00317 | Cpe-Chr15:4141089 | 9.57E-62 | dispersed | |
| Cpe09g00268 | Cpe-Chr9:1559055 | Cpe15g00317 | Cpe-Chr15:4141089 | 3.94E-37 | dispersed | |
| Cpe13g01013 | Cpe-Chr13:8342520 | Cpe15g00317 | Cpe-Chr15:4141089 | 5.50E-19 | dispersed | |
| Cpe15g00317 | Cpe-Chr15:4141089 | Cpe05g00656 | Cpe-Chr5:3995270 | 2.68E-123 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe15g00317 | K08360 | - | csv:101209308 | 352.058 |