Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00371 ATGCCGTCAAAGGGAAAGAAGAACTCAAAGACACTCTCTAGATTATCAAACTCGAACCACTCTCAATCTCCAGTGTCACGATTGGCAATACCTCCTGCCTCTGAAGTTTGTGAAGATGATTTTCTTTCCTCTATTGAAGAAGCTTCAAGTAAATATCCTTCTTTGATAGGTAAATCTGCTTTTGTTGGAAGAGTTACTAATGCTTCAGTTCAATCTACTGGCTGCAAAGTTTGGGTTTCTGAATCTTCTATGGTTTCTTCTAGCTTCACCCAAGGGGCTATTGTCTCGATAGCACTTAGTTCCGTGGGAGATAACAGTTCCAAAGGCTTTCCTCTTTCCTCGTTAGCAGATGAATGTGGTAGGCACTTTGGGGTTGATTATGGAGATTCATTAAACCATGAAGCGGGAAATTACTTTGTTCTTGCGAGAATTTTCTCTTCTAGTAAGGAGTTAAATGATGGAGTGCAATTATCAACAACCCTGTCGTTTACCTTGGGTTGCCCTACAATTGGTCGTGTTGTGTTTATCTTCCCGTTAAAGACCCATGTATGCAATGATGCATTAAATGAAAATGGGAAATTGAAAAGCACAGAAGTTGAATCTCTGGGAATATACAATTGTAAGGAACTGTTCCTGGAGCTAGTTTCTTCAACCAATGTATCAAAAAAAGACAGCTTATTCTCTTCCTCAACTATTTATTCAAGGAAGGTTCATGGTCATAGTGAAAATGGTAATTTAGCATCCCCAAGCACCATGCTGTCTACATCTCCTAAATGTGATGATGCAGTATCAAATTTACTTGTAGAGAGGCCATGCGCTCATTCACTTATTAAGGAGGCCTTAGGAGATGATAGTGTTAGAAAAACTCTACAGACGATTGCTTCCAATGAGTTGTATAAACGTTGTTTGCTGCGGGGTAATCTTGTAACTTTCCCAGTACTTTCAGATCTTTGTACATTCCATGTGAGGGGTGGTAAAGGACTGTCAGGATATGATGACTCGCACGATTCTATGCACAGTGGAAGCGACTCTATGCACAGTGGAAGCGACGATCATTTTCAACATTTTTCATCAAATGAATATGTGGATTATGTTTTCAGTATAGACCAGTTGACAAAAGTATTTATAAATGTTCAATCAACTACAGTCTCAGAGACAGTGCAAGAAAGAGTTTCATCAAAAGTGGATCCTCAAAATCTAAATATGAGAGCTAAAGTAAAGCCTAAAGTTTGGAAATTGGGTGGTCTTTCTAAAGAATATTCAGTTTTGAAGGACATCATAATTGCCTCATCATTAAATAACACCGGTGTACTTCTTCATGGTCCTCCTGGTACGGGAAAAACTTCTTTGGCTCAATTATCTGCTCATGACGCTGGTGTCAACTTATTCTATTTGAATGGACCTGAAATTATAAGTCAATATCATGGGGAAAGTGAACAGGCCTTGCATGGTGTTTTTGAGGAGGCAAGCCAAGCTGCGCCTGCTGTGATATTAATTGATGAGTTGGATGCTATTGCGCCTGCAAGAAAAGATGGAGGTGAAGAGCTGTCTCAAAGAATTGTTGCTACTTTGCTTAATCTAATGGATGGGATCAACCGAAGTGGTGGGCCACTTGTAATTGCTTCTACCAACAGGCCTGATAGCATTGAGCCTGCACTAAGGCGGCCTGGGAGACTTGACCGGGAAATTGAAATAGGTGTGCCATCTCCCAATCAACGGTTAGATATTCTACACACAATACTAAGTGAAATGGAGCACTCTCTTTCAGTGGCGCAAGTTCAACATCTAGCTATGGTTACACATGGATTTGTGGGTGCCGATTTGGCTGCCCTTTGCAATGAGGCTGCCTTAATCTGTATAAGGCAATATCATGAGTTTAAAGTTTCTACTGATTTCGTTAGTTCTGGTAGATCTGTTATAGCAGAGGAACAACATATGGTTACTAAGGTGGATAACGAAGCCGATGTCGATCATAGGATTTCGGAATCTGTTCTCTCAAAAGATGCAAGAAGTATATCAGGCATATGCTCAAACTCAGCGCCTTTATCATTTTCTGAAGATACTCTTACATCTGAGTCTTTAGCATGTGTGTCCTCGAATGAAGTGGTTGCTGATAGTGAGGATATTTTTAACTCTTCTGAAATCAAGTGTAGATTGAAGATTGCTTTTGAAGACTTTGAGATGGCTAGAATGAAAGTGCGGCCTAGTGCCATGCGAGAGGTCATACTTGAGGTTCCAAAGGTAAAATGGGAAGATATTGGTGGACAAGGGGAGGTTAAGGTTCAATTGATGGAAGCAGTGGAATGGCCTCAAAAACATCAGGATGCATTCAAGCGAATAGGGACTCGACCTCCAACAGGAGTGTTAATGTTTGGTCCTCCTGGATGTAGCAAAACCCTAATGGCACGTGCCGTAGCTTCTGAAGCAGGACTAAATTTCCTTGCAGTAAAGGGCCCAGAACTTTTCAGTAAATGGGTTGGTGAATCTGAGAAAGCTGTTAGATCTCTATTTGCGAAGGCAAGAGCTAATGCCCCATCAATCATTTTTTTTGATGAAATTGATGGTCTTGCTGTCATTCGTGGGAAGGAAAGTGATGGGGTTTCTGTCTCTGATAGAGTTATGAGTCAACTTCTTGTTGAATTGGATGGTTTACATCAGAGAGTTGGTGTCACTGTCATTGCTGCTACTAATCGGCCAGATAAGATTGATCCAGCCCTTCTAAGGCCAGGACGTTTTGATCGGTTGCTATATGTTGGGCCTCCAAATGAATCCGAACGAGAAGAGATATTTCGTATCCATTTGTGCAAAGTTCCTTGCAGCCCAGATGTCAGCACAAGGAAGTTGGCTTCTCTTACCCCAGGGTGTACAGGGGCTGACATATCATTAATTTGCAGAGAAGCAGCCTTATTTGCCCTTGAGGAAAACCTTGAGGCCTCAAAAATAAATATGCAACATTTAGAAACTGCAGCTGGACATGTGAAGCCATCTGAAACTGAACCTTATCGAGAATTATCATCTAGGCTTCAAATGAGCAGCTACAAATTGGCTGCTGGTGATTCATTTACACATTGTCTTCAAGCAATTGTTCTGTCATGGAAATCACTCAAGAACAAGGAGCGACATGGAACAGATTTGAAGGCTTATGAACTGCAGAGGGTTGAAGCA 3165 41.23 MPSKGKKNSKTLSRLSNSNHSQSPVSRLAIPPASEVCEDDFLSSIEEASSKYPSLIGKSAFVGRVTNASVQSTGCKVWVSESSMVSSSFTQGAIVSIALSSVGDNSSKGFPLSSLADECGRHFGVDYGDSLNHEAGNYFVLARIFSSSKELNDGVQLSTTLSFTLGCPTIGRVVFIFPLKTHVCNDALNENGKLKSTEVESLGIYNCKELFLELVSSTNVSKKDSLFSSSTIYSRKVHGHSENGNLASPSTMLSTSPKCDDAVSNLLVERPCAHSLIKEALGDDSVRKTLQTIASNELYKRCLLRGNLVTFPVLSDLCTFHVRGGKGLSGYDDSHDSMHSGSDSMHSGSDDHFQHFSSNEYVDYVFSIDQLTKVFINVQSTTVSETVQERVSSKVDPQNLNMRAKVKPKVWKLGGLSKEYSVLKDIIIASSLNNTGVLLHGPPGTGKTSLAQLSAHDAGVNLFYLNGPEIISQYHGESEQALHGVFEEASQAAPAVILIDELDAIAPARKDGGEELSQRIVATLLNLMDGINRSGGPLVIASTNRPDSIEPALRRPGRLDREIEIGVPSPNQRLDILHTILSEMEHSLSVAQVQHLAMVTHGFVGADLAALCNEAALICIRQYHEFKVSTDFVSSGRSVIAEEQHMVTKVDNEADVDHRISESVLSKDARSISGICSNSAPLSFSEDTLTSESLACVSSNEVVADSEDIFNSSEIKCRLKIAFEDFEMARMKVRPSAMREVILEVPKVKWEDIGGQGEVKVQLMEAVEWPQKHQDAFKRIGTRPPTGVLMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAVIRGKESDGVSVSDRVMSQLLVELDGLHQRVGVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNESEREEIFRIHLCKVPCSPDVSTRKLASLTPGCTGADISLICREAALFALEENLEASKINMQHLETAAGHVKPSETEPYRELSSRLQMSSYKLAAGDSFTHCLQAIVLSWKSLKNKERHGTDLKAYELQRVEA 1055
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4931987 4940773 + Cp4.1LG15g03750.1 Cpe15g00371 481829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00371 1055 Coils Coil 1038 1055 - -
Cpe15g00371 1055 Gene3D - 745 920 IPR027417 -
Cpe15g00371 1055 CDD AAA 778 920 - -
Cpe15g00371 1055 CDD AAA 414 566 - -
Cpe15g00371 1055 Gene3D - 383 566 IPR027417 -
Cpe15g00371 1055 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 413 631 IPR027417 -
Cpe15g00371 1055 Gene3D - 921 986 - -
Cpe15g00371 1055 MobiDBLite consensus disorder prediction 1 28 - -
Cpe15g00371 1055 PANTHER - 20 1014 - -
Cpe15g00371 1055 PANTHER AAA-FAMILY ATPASE 20 1014 - -
Cpe15g00371 1055 Pfam ATPase family associated with various cellular activities (AAA) 788 919 IPR003959 GO:0005524|GO:0016887
Cpe15g00371 1055 Pfam ATPase family associated with various cellular activities (AAA) 437 566 IPR003959 GO:0005524|GO:0016887
Cpe15g00371 1055 Pfam AAA+ lid domain 942 987 IPR041569 -
Cpe15g00371 1055 Pfam AAA+ lid domain 594 625 IPR041569 -
Cpe15g00371 1055 ProSitePatterns AAA-protein family signature. 890 908 IPR003960 GO:0005524|GO:0016887
Cpe15g00371 1055 Coils Coil 969 989 - -
Cpe15g00371 1055 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 746 996 IPR027417 -
Cpe15g00371 1055 Gene3D - 567 678 - -
Cpe15g00371 1055 SMART AAA_5 433 569 IPR003593 -
Cpe15g00371 1055 SMART AAA_5 784 922 IPR003593 -
Cpe15g00371 1055 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g01089 Cpe-Chr8:8262831 Cpe15g00371 Cpe-Chr15:4931987 3.32E-35 dispersed
Cpe15g00371 Cpe-Chr15:4931987 Cpe19g00423 Cpe-Chr19:3833139 1.96E-34 dispersed
Cpe15g00371 Cpe-Chr15:4931987 Cpe03g00187 Cpe-Chr3:928604 1.46E-35 transposed
Cpe15g00371 Cpe-Chr15:4931987 Cpe10g00233 Cpe-Chr10:1359701 1.61E-34 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00371 - - cpep:111811570 1923.67