Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00386 ATGTCCGACTCTAAGCATTGTCTCCTGCCTTCTCCCATGGCTGCACAAAGCTCCAATTCCAAGTTTCTTCTCATATGTTCGTTCTTCCTTATCAACATTTCACTGTTCCTCTCTACACTTCCATTTGCAAGTTCTTTATCTTTCAACTTCACTTCTTTCAATCCAAGCAACACCGACATCATCTACGACAGAGCATTCCCGACAAACCAAGCAATCGAGCTCACTGGGGGCGACGCCAACATGGATTATGTTGGAAGAGCTATGTATTCCCAACCCTTGCATCTTTGGGATAAAGTCTCTGGAAACTTGTCGAGTTTCCAAACCAATTTCTCCTTTGTCATTGATTCAAGGCAAAAATCAACCTATGGTGATGGCCTTACCTTCTTCTTTGCCCCTGTTGGTTCTAAGTTCCAGGCTAACATCTCAAGAGGAAGTGGCTTGGGTATTGGCTACGATCCCAAGTTATCGAATGCGACAACCACATTTTTTGCAGTTGAGTTTGATATCTACAGCAACCTTTTCGACCCACCTGAAAAGCTCGAACATGTAGGTATCGATATTAGTTCAATGAGATCTATTGCATATTCGATATGGAAATGTGATATCAAGGGAGGGAAGAAGAATCATGCTTGGATTAAATATGATTCTGTTAATCATAATTTGAGTGTTACTTTTACTGGGTTTGATCTGAATGGTAGTATTCTGTTCCAACATCTTCACCATGTTGTAGATTTGAGGTTGCATCTACCTGAACGGGTTACTTTTGGCTTTTCTGCTTCCACTGGTTATGCATATGCAACTCACACTGAATTGGCTCGAGCAACGAACAATTTTAAGGAGGATAAGAAGCTTGGAAAAGGAGGATTTGGCGATGTTTATAAAGGTTTCTTAAGTGACTTGAATTGCGATGTTGCTGTGAAGAGAATATCAAAAGGGTCTAAGCAAGGGATAAAGGAAAAACCTTTCGACCCGAATGCAGAGGACGAGAAGATTGTGATGGTGGAGTGGGTTTGGAAGCTTTATGGTTGTGGAAAGCTTCTTGAAGGAATAGACTCAAAACTGATCCAAGAAAGGTTTGAAGATGAGCAGCAGAAGGAGGAGCAGATGGAGCGTCTGATGGTGGTGGGTCTGTGGTGTGCTCATCCAGATAGCAATTGCAGACCTTCAATAAGACAAGCCATAAACGTGATGAACTTCGAAGCGCCATTGCCTCTTCTTCCATCTCAATTGCCTGTACCCACTTATGAATTTCTTCCCATTAGAAGGCCAAATGCTTCGTCTTCACCATCATCATCAGCTACTCAAAATAGTGTTGCTTCTCATACTATTAATAGCTCCAACTTTAGTAATGTCGTCTCTATGCTCACCTCTCCAAACCTTTTCCTCCTAATCTTCTGCTACTATAGCTTCTTGTGGAGTATAACCAACCCAGTTTCAGTCTCAGCCACCATTTCTTCTGAGAACTTAACGTTCAGCTTCGTTGGTTTCGACCCGAATGGCCACGACATTCATTACGAAGGAAATGCATACTCTTCCAACAATGTCATTCAGCTTACCATGAACCAGAGAGACATGCCTCTCGATGAAAGTGTTGGCCGTGCTACCTACAAAGATCCTCTCCATCTTTGGGAGAGTGTCCACAAGAATCTTGCAGACTTCACCACCAACTTCTCCTTCTCAATCGACTCGCAGGGAAGTCACCCTTATGGCGATGGCTTTGCCTTCTTCCTCGCCCCAAATGGCTCGAGTCTTCCGCATTACTCAGGAGGTAGGAACTTTGGTCTCTTGAATTCCAACAAGAGTGATCTAGAGTACTCAACACCAACAGCAACAGCCAACAACTTCGTTGCTGTTGAGTTCGATACCTACTCGAATGTATTATCGGAGGATCCGGGGGGGAATCACATCGGCATCGATGTAAACTCCGTTATATCTCAATTCACTACTTCATGGTGGTGGAGTGACATAGAACACGGTGGGAAAGTTCAAGCAGTGATAAGTTACAATTCAACCTCCCACAATTTGACTGTTTTTCTAGTTGATGAAGGAGATTCTGAAGTTTCTCCAAGAAACTCCTCTAGCTTCTCTTTCAATATTGATTTAAGAGAGCATCTACCAGAATGGGTTACGATCGGCTTCTCGGGATCGACTGGAAATCTATTCGAGATTCATACGATTAGCTCGTGGAGTTTCAACTCTAGATTACAAGTTGAAGTGAATGTTACCACCACAACTGATCCAGCTAGCTCTCCAGTTCACTCCACTATAGGAATTTCCATGAAATGGCTCATGATAATCATGGAAGTGGCACTTCCACTCATTCTAATCTTGGGGTTTGCTTGGTTTTGGATATGGATCATGAAGAGAACCATTAGAAGAAGAAGCCTGAGAAGGGACCAAGAGGAAGATCTTGAGAACGAAACAGGGCCAAGGAAGATTTCATATAAAGATCTATCAGAAGCAACCAACAAATTCAGTGATGAAAATCTATTGGGAGAAGGAGGATTCGGGAAGGTATACAGAGGATTTCTAGACAACAGAGAACTTGATGTAGCAGTGAAGAGAATCACTCCAAACAACCTCCATCAAGGCTCAAGAGAATTTGCATCAGAAGTGAAAACAATCAGCAAATTAAGGCATAAGAACTTGGTAGAACTGATTGGATGGTGCTGCAGCAGGAACGAAGAATATCTCATAGTCTACAAATTCATGCCTAACAAGAGCTTAGATTTCCATCTATTTCAGCAAAACAATCTCCTAACATGGAATCACAGATACAGAATCACAGTAGGTTTAGCCTCGGCACTACACTATCTACAAGAAGAACAAGATCCATACGTTCTACACAGAGATATAAAATCAAGCAATATCTTACTAGATGCCGAATTCAACGCGAAACTCGGCGATTTCGGGCTTGCTAAACTCGTAGATCGTGGAAAACCATCAACATCCACCACGCTACGAGGAACAGAAGGTTATGTAGCACCAGAGTACCTGCAAAGCAGCATTTCAAGTAAAGAATCCGACATCTACAGCTTCGGCATCGTGTGTTTGGAAATCGCCTGCGGAAAACGAGCCCTAGGTGAAACGAGAGAAGACGGAAGGAAATGTTTGATAAAGCTAGTTGAATGGGTGTGGGATTATTACCGACGAAGGAGTGTGATTGAGGCCGCCGATCCGAAATTGCGCCAAATTTTCAAAGGAGATGAGATGAAACAACTGTTGATCGTCGGACTTGCTTGCGCTCAGCCCGATTTCTGTCTGCGGCCTTCGATCAAACAGGTGATCGACATGCTTAACTTCAAATCTCCATTGCCGAATCTGCCATTGGAATATCCCGGATTCTCGACATCTGCGGTGTTTTTGAGTGCGCAAATGGAATCATTATGTTCTTCGGCGTGTTCAGAGAACGGTAATCTCCATGGCAATAGCATATCTTCCAAGATTTCCACAGCTTCTTCCACATTTTCGAATTTGGGATTATTTCGATCTCAA 3495 42.95 MSDSKHCLLPSPMAAQSSNSKFLLICSFFLINISLFLSTLPFASSLSFNFTSFNPSNTDIIYDRAFPTNQAIELTGGDANMDYVGRAMYSQPLHLWDKVSGNLSSFQTNFSFVIDSRQKSTYGDGLTFFFAPVGSKFQANISRGSGLGIGYDPKLSNATTTFFAVEFDIYSNLFDPPEKLEHVGIDISSMRSIAYSIWKCDIKGGKKNHAWIKYDSVNHNLSVTFTGFDLNGSILFQHLHHVVDLRLHLPERVTFGFSASTGYAYATHTELARATNNFKEDKKLGKGGFGDVYKGFLSDLNCDVAVKRISKGSKQGIKEKPFDPNAEDEKIVMVEWVWKLYGCGKLLEGIDSKLIQERFEDEQQKEEQMERLMVVGLWCAHPDSNCRPSIRQAINVMNFEAPLPLLPSQLPVPTYEFLPIRRPNASSSPSSSATQNSVASHTINSSNFSNVVSMLTSPNLFLLIFCYYSFLWSITNPVSVSATISSENLTFSFVGFDPNGHDIHYEGNAYSSNNVIQLTMNQRDMPLDESVGRATYKDPLHLWESVHKNLADFTTNFSFSIDSQGSHPYGDGFAFFLAPNGSSLPHYSGGRNFGLLNSNKSDLEYSTPTATANNFVAVEFDTYSNVLSEDPGGNHIGIDVNSVISQFTTSWWWSDIEHGGKVQAVISYNSTSHNLTVFLVDEGDSEVSPRNSSSFSFNIDLREHLPEWVTIGFSGSTGNLFEIHTISSWSFNSRLQVEVNVTTTTDPASSPVHSTIGISMKWLMIIMEVALPLILILGFAWFWIWIMKRTIRRRSLRRDQEEDLENETGPRKISYKDLSEATNKFSDENLLGEGGFGKVYRGFLDNRELDVAVKRITPNNLHQGSREFASEVKTISKLRHKNLVELIGWCCSRNEEYLIVYKFMPNKSLDFHLFQQNNLLTWNHRYRITVGLASALHYLQEEQDPYVLHRDIKSSNILLDAEFNAKLGDFGLAKLVDRGKPSTSTTLRGTEGYVAPEYLQSSISSKESDIYSFGIVCLEIACGKRALGETREDGRKCLIKLVEWVWDYYRRRSVIEAADPKLRQIFKGDEMKQLLIVGLACAQPDFCLRPSIKQVIDMLNFKSPLPNLPLEYPGFSTSAVFLSAQMESLCSSACSENGNLHGNSISSKISTASSTFSNLGLFRSQ 1165
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 5085194 5100577 + Cp4.1LG15g03810.1 Cpe15g00386 481844

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00386 1165 Gene3D Phosphorylase Kinase; domain 1 787 903 - -
Cpe15g00386 1165 SUPERFAMILY Concanavalin A-like lectins/glucanases 43 268 IPR013320 -
Cpe15g00386 1165 SMART serkin_6 825 1101 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe15g00386 1165 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IX.1-LIKE 269 319 - -
Cpe15g00386 1165 ProSitePatterns Legume lectins alpha-chain signature. 249 258 IPR000985 -
Cpe15g00386 1165 SUPERFAMILY Concanavalin A-like lectins/glucanases 490 736 IPR013320 -
Cpe15g00386 1165 Pfam Protein kinase domain 826 1075 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe15g00386 1165 Gene3D - 43 272 - -
Cpe15g00386 1165 Gene3D Transferase(Phosphotransferase) domain 1 904 1113 - -
Cpe15g00386 1165 Gene3D Transferase(Phosphotransferase) domain 1 320 417 - -
Cpe15g00386 1165 CDD lectin_legume_LecRK_Arcelin_ConA 489 735 IPR001220 GO:0030246
Cpe15g00386 1165 Gene3D Phosphorylase Kinase; domain 1 273 319 - -
Cpe15g00386 1165 PANTHER - 269 319 - -
Cpe15g00386 1165 ProSitePatterns Legume lectins beta-chain signature. 616 622 IPR019825 -
Cpe15g00386 1165 Gene3D - 486 745 - -
Cpe15g00386 1165 SUPERFAMILY Protein kinase-like (PK-like) 262 319 IPR011009 -
Cpe15g00386 1165 Pfam Legume lectin domain 489 739 IPR001220 GO:0030246
Cpe15g00386 1165 Pfam Legume lectin domain 45 269 IPR001220 GO:0030246
Cpe15g00386 1165 ProSitePatterns Legume lectins alpha-chain signature. 705 714 IPR000985 -
Cpe15g00386 1165 ProSitePatterns Protein kinases ATP-binding region signature. 831 854 IPR017441 GO:0005524
Cpe15g00386 1165 PANTHER - 479 1154 - -
Cpe15g00386 1165 PANTHER - 33 268 - -
Cpe15g00386 1165 PANTHER - 322 442 - -
Cpe15g00386 1165 ProSitePatterns Serine/Threonine protein kinases active-site signature. 947 959 IPR008271 GO:0004672|GO:0006468
Cpe15g00386 1165 CDD STKc_IRAK 831 1100 - -
Cpe15g00386 1165 CDD lectin_legume_LecRK_Arcelin_ConA 46 269 IPR001220 GO:0030246
Cpe15g00386 1165 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IX.1-LIKE 479 1154 - -
Cpe15g00386 1165 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IX.1-LIKE 33 268 - -
Cpe15g00386 1165 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IX.1-LIKE 322 442 - -
Cpe15g00386 1165 ProSiteProfiles Protein kinase domain profile. 825 1101 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe15g00386 1165 SUPERFAMILY Protein kinase-like (PK-like) 805 1103 IPR011009 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00386 - - - csv:101209022 1113.98
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Cpe04g00360 Cpe15g00386 CST
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00778 Cpe-Chr1:4536449 Cpe15g00386 Cpe-Chr15:5085194 1.71E-07 dispersed
Cpe14g00635 Cpe-Chr14:4083994 Cpe15g00386 Cpe-Chr15:5085194 3.91E-17 dispersed
Cpe15g00386 Cpe-Chr15:5085194 Cpe08g01239 Cpe-Chr8:8981149 2.39E-06 dispersed
Cpe11g00095 Cpe-Chr11:507510 Cpe15g00386 Cpe-Chr15:5085194 6.21E-09 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g905 . Blo03g00035 Bda06g01133 . . . . . Cmo19g00508 Cmo11g01451 . . . . . Cpe04g00360 Cpe15g00386 Bhi05g00956 . . . . . . . . . . . . . . . . . Lsi03g00681 Csa07g00619 . Cme01g00179 . . . . . . . . . . . Cma11g01676 Cma19g00490 Car11g01167 Car19g00367 . . . . . . . . . Cla09g01596 . . . . . . . . Chy01g00189 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0013790 0 1 0 0 0 1 1 1 1 1 1 1 1 0 0 1 1 0 1 1 1 2 1 0 0 1 1 0 1 0 20
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62854 PF00069 Pkinase 6.30E-44 CL0016 Cpe PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cpe15g00386 Cpe_Chr15 FPKM 0.0 0.0 0.0 0.161318 0.464786 0.664203 0.262047 0.350347 0.167446 0.0