Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00410 ATGTCTAATTCACTCAACCCTCCACCACTTCCCGCCGGCAAACACTCCGGCCGCCCCCCTTCTCTGGTGGGTCTCCGCCACTTCCTCCTCCTCCTTCTCCTCCTCCTCTGTTCACTTTCTCTCTCCCATGGCGATGAACTTCAGCCACTTTTGGACCTCAAGTCCGCCCTCCACAACAACTCAACCTCCATGGTTCTTAGTTCTTGGGTGAGAGGGAAAGATGTTTGCAGCAGCTTCCATGGCATTGTCTGTGATTCCAATGGCTTTGTTGTGGAAATCAATCTCTCTGCTCATAACTTATCTGGGATTCTTCCTTTTCATTCCATTTGTTCTTTGCAGTCTCTTGAGAAGCTCTCTTTTGGGGGTAATTTTTTGTATGGGACAGTCAGTAATGCCTTGAGGAACTGTTCCATGTTGAAGTATTTGGATTTGGGACAGAATTTCTTTACTGGTGAAGTGCCTGATTTGTCTTCTTTGGAGAGATTAAGGTTTTTGAATTTGAATAACAGTGGTTTTTCTGGAGATTTTCCTTGGAAATCTCTTCTGAATCTTACTGATTTGGAGTTCTTGAGCCTTGGAGATAATTCATTTAACCCAACAACTTCATTCCCATCAGAGATTATTGAGCTTAACAAGCTTTATTGGCTTTACCTCTCTAACTGCAGCATTCATGGAGAAATCCCACCTGGGATTGGGAACCTCTCTCTGCTTGAGAATCTTGAGCTCTCACAAAATGAACTTACAGGTGAAATTCCTTCTCAGATTGTGAATCTCAAGAGTCTATGGCAGCTGGAGTTACACGAGAATTCCTTAACCGGGAAGCTTCCGACTGGGTTCGGTAACCTCACTGGACTGAGGAAATTTGATGCCTCTACTAATAATCTTGAAGGTGATCTTATGGAGTTGAGGTTCTTGACCAATCTGGAGTCCTTGCAGCTCTTTCAAAATCGATTTTCCGGTACGATTCCGGAGGAGTTCGGGGACTTCAAGGAGCTTGTTGAACTATCTCTTTACCAGAACAAGCTCACTGGTAGCCTGCCTCAAAGAATTGGATCTTGGGCAGCCTTCCTTTTCATTGATGTTTCAGAGAATTTCTTATCTGGACCTATACCTCCAGACATGTGCAAGCAGGGCAGTATGACTGATCTCCTGATGCTGCAAAACAATTTCAGTGGTGGAATCCCAGAAAGCTACATGAACTGTAAATCTTTGCAGCGTTTTCGTGTAAACAATAACTCTCTTTCGGGTGTCGTTCCTGCTGGGATTTGGAGTCTGCCGAATCTTAGCATCGTTGATCTTTCAATGAATCAGTTCGACGGTCTGGTGACTTCCGATATCGGTAAAGCAAAAGCTCTTGCCCAGTTATTCTTATCGAACAACCGGTTTTCTGGAAAACTACCAGCCGAGCTTGGCGAAGTATCGTCCTTAGTCTCGATCCAGATCGATTTGAACCAATTTGTTGGTCCAATACCAGAATCACTTGGCAAGTTGAAGGTCTTAGACAGCCTTTCTTTGAACAACAACAAGTTTTCTGACAACATACCTAGCTCATTAGGCTCTTGCAGTTCTCTTTCTACCATAGATCTGTCTATGAATTCGTTCTCCGGGCATATTCCAGAGAATCTTGGATATCTGCCAATTCTAAACTCCTTGAATCTGTCGAACAACGAACTTTCAGGCGAAATTCCAACTAGTTTTTCGCAGCTGAAGCTAAGCAGTTTCGACCTGTCTAATAACAGGTTAAGTGGCCAAGTACCTGAATCACTAGCAATCCAAGCCTTTGAAGAAAGTTTCATGAGAAATCCAGGCTTGTGCAGTGAGTCTATTAGACACTTGAGTTCATGTTCATCAACCTCTAGATCATCCAGCCACATCAGGTCGTTGCTGTCATGTACCATTGCTGGAATTCTAGTGTTGCTGCTCATGTCCTTCTTGTGCTTGTTGTTTGTTAAATCGAAACGTAACAATGCTAAGCATTTACTGAAATCCCGATCGTGGGATATGAAGCCATTCCACATAGTTTGCTTCACGGAAAAGGAAATCATTGATTCAATCAATTCTCACAACTTGATAGGCAGAGGAGGATCTGGAAATGTGTACAAAGTTGTATTAAAATATGCATACACGTGCAAGATAAACGAGAAGAGCGACGTTTACAGCTTCGGAGTGGTCCTAATGGAACTAGTAACAGGAAGGAAGCCCAATGAGCCAGAGTTTGGGGAGAACAAAGACATTGTACAATGGGCACACAGCAGAATGAGAGACCTAAAAGGCAATCTGAAAGATATGGTAGATCCTAGCATCTCAGAGGTTCAAGTGGAAGATGCAATCAAAGTGTTACGAATCGCACTTCGCTGCACGGCTAAGACTCCGTCTACAAGGCCCTCCATGAGAATGGTAGTTCATATGCTTGAAGAAGCTGAACCTTGTAACTTTATTGACATTGTTGTCAAGAAAGAATGTGCAAAGTAA 2472 43.37 MSNSLNPPPLPAGKHSGRPPSLVGLRHFLLLLLLLLCSLSLSHGDELQPLLDLKSALHNNSTSMVLSSWVRGKDVCSSFHGIVCDSNGFVVEINLSAHNLSGILPFHSICSLQSLEKLSFGGNFLYGTVSNALRNCSMLKYLDLGQNFFTGEVPDLSSLERLRFLNLNNSGFSGDFPWKSLLNLTDLEFLSLGDNSFNPTTSFPSEIIELNKLYWLYLSNCSIHGEIPPGIGNLSLLENLELSQNELTGEIPSQIVNLKSLWQLELHENSLTGKLPTGFGNLTGLRKFDASTNNLEGDLMELRFLTNLESLQLFQNRFSGTIPEEFGDFKELVELSLYQNKLTGSLPQRIGSWAAFLFIDVSENFLSGPIPPDMCKQGSMTDLLMLQNNFSGGIPESYMNCKSLQRFRVNNNSLSGVVPAGIWSLPNLSIVDLSMNQFDGLVTSDIGKAKALAQLFLSNNRFSGKLPAELGEVSSLVSIQIDLNQFVGPIPESLGKLKVLDSLSLNNNKFSDNIPSSLGSCSSLSTIDLSMNSFSGHIPENLGYLPILNSLNLSNNELSGEIPTSFSQLKLSSFDLSNNRLSGQVPESLAIQAFEESFMRNPGLCSESIRHLSSCSSTSRSSSHIRSLLSCTIAGILVLLLMSFLCLLFVKSKRNNAKHLLKSRSWDMKPFHIVCFTEKEIIDSINSHNLIGRGGSGNVYKVVLKYAYTCKINEKSDVYSFGVVLMELVTGRKPNEPEFGENKDIVQWAHSRMRDLKGNLKDMVDPSISEVQVEDAIKVLRIALRCTAKTPSTRPSMRMVVHMLEEAEPCNFIDIVVKKECAK 823
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 5252990 5256298 + Cp4.1LG15g04090.1 Cpe15g00410 481868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00410 823 Pfam Protein tyrosine and serine/threonine kinase 709 804 IPR001245 GO:0004672|GO:0006468
Cpe15g00410 823 Pfam Leucine rich repeat N-terminal domain 44 85 IPR013210 -
Cpe15g00410 823 SUPERFAMILY RNI-like 360 605 - -
Cpe15g00410 823 Gene3D Ribonuclease Inhibitor 489 616 IPR032675 -
Cpe15g00410 823 Gene3D Ribonuclease Inhibitor 378 488 IPR032675 -
Cpe15g00410 823 Gene3D Ribonuclease Inhibitor 157 377 IPR032675 -
Cpe15g00410 823 SUPERFAMILY Protein kinase-like (PK-like) 709 805 IPR011009 -
Cpe15g00410 823 Gene3D Ribonuclease Inhibitor 45 156 IPR032675 -
Cpe15g00410 823 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 26 705 - -
Cpe15g00410 823 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 705 815 - -
Cpe15g00410 823 Gene3D Transferase(Phosphotransferase) domain 1 683 816 - -
Cpe15g00410 823 SMART LRR_typ_2 112 135 IPR003591 -
Cpe15g00410 823 SMART LRR_typ_2 425 449 IPR003591 -
Cpe15g00410 823 SMART LRR_typ_2 305 328 IPR003591 -
Cpe15g00410 823 SMART LRR_typ_2 545 569 IPR003591 -
Cpe15g00410 823 SMART LRR_typ_2 258 281 IPR003591 -
Cpe15g00410 823 SMART LRR_typ_2 497 521 IPR003591 -
Cpe15g00410 823 SMART LRR_typ_2 184 210 IPR003591 -
Cpe15g00410 823 SMART LRR_typ_2 329 353 IPR003591 -
Cpe15g00410 823 SUPERFAMILY L domain-like 46 213 - -
Cpe15g00410 823 PANTHER RECEPTOR-LIKE PROTEIN KINASE HAIKU2 26 705 - -
Cpe15g00410 823 PANTHER RECEPTOR-LIKE PROTEIN KINASE HAIKU2 705 815 - -
Cpe15g00410 823 SUPERFAMILY L domain-like 199 442 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00496 Cpe-Chr2:2888980 Cpe15g00410 Cpe-Chr15:5252990 8.02E-28 dispersed
Cpe06g00472 Cpe-Chr6:2787761 Cpe15g00410 Cpe-Chr15:5252990 0 dispersed
Cpe13g00719 Cpe-Chr13:6640505 Cpe15g00410 Cpe-Chr15:5252990 1.78E-152 dispersed
Cpe15g00410 Cpe-Chr15:5252990 Cpe06g00058 Cpe-Chr6:303308 1.88E-132 dispersed
Cpe10g00174 Cpe-Chr10:1032082 Cpe15g00410 Cpe-Chr15:5252990 6.73E-17 transposed
Cpe11g00500 Cpe-Chr11:2919597 Cpe15g00410 Cpe-Chr15:5252990 6.51E-25 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62855 PF07714 PK_Tyr_Ser-Thr 8.00E-07 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00410 - - cmos:111455011 1296.95