Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe15g00463 ATGGCGAAGCCATTGATGGCTATGGTATTTCTTCTTTGCTTCTTCGCTCTCCATTCTGCCGATGATTCCTCTTATCGTTCCCTTGAGTACTCGATTCTCCCTCGCGCTCTGTCTGACCAGAAGTCCTTGTGCTCTCAACTTGTTCAACCTGTTGGCTATCCTTGCGCGGAGCATCAGATACAAACGAAGGATGGATTTTTATTGGGTCTTCAACGAGTATCTTCACGCGATGGAGAATTGGAAAAGCAAAAGGGCCCTCCAATTTTGCTACTCCATGGACTGTTCATGGGTGGCGATGCATGGTTTTTGAATTCTGCTAGAGAATCTTTAGGATTTATCCTTGCAGATAATGGATTTGATGTGTGGATAGGAAATGTGCGTGGAACTCGGTGGAGTCATGGGCATACATCCGTATCAGAGGATGAGAAGATAATTCTTGCCGCGGGATTTCATGAACTCAACTTTAAAAGCGATTGGGGAACAGTCCTTTTAGATGATCTTTGTGATCGGCTCGTTAACTGCATCAATGTTCTAAGTTCAATAACAGGTGAAAATTGTTGCCTTAATGGCTCACGGTTCGACTTATTTTTCGAATACGAACCACATCCATCATCAGCAAAAAACTTGCACCATCTTTTCCAAATGATCCGCAAGGGTACTTTTTCCAGGTATGACTACGGATTGTTAAAGAATCTGAGAGTCTACGGCCAAAGGAAGCCTCCTGCATTTGATCTCAGCCGTATTCCTAAGTCCTTGCCGCTGTGGATGGCGTACGGGGGCAGCGACGAGTTGTCCGATTGGACAGATCTGCAGCACACGATCAAGGAGCTGAAGTCGGTACCAGAATTGGTTTACCTTGAAAATTATGGCCATGTGGACTTCATTTTGAGCATGAAAGCGAAGGAAGATGTGTATGATCCTATGATCAAATTCTTGAAATCCTTGGGAAAGTCAGGTAGTTTGTAA 966 44.41 MAKPLMAMVFLLCFFALHSADDSSYRSLEYSILPRALSDQKSLCSQLVQPVGYPCAEHQIQTKDGFLLGLQRVSSRDGELEKQKGPPILLLHGLFMGGDAWFLNSARESLGFILADNGFDVWIGNVRGTRWSHGHTSVSEDEKIILAAGFHELNFKSDWGTVLLDDLCDRLVNCINVLSSITGENCCLNGSRFDLFFEYEPHPSSAKNLHHLFQMIRKGTFSRYDYGLLKNLRVYGQRKPPAFDLSRIPKSLPLWMAYGGSDELSDWTDLQHTIKELKSVPELVYLENYGHVDFILSMKAKEDVYDPMIKFLKSLGKSGSL 321
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 5674271 5679736 + Cp4.1LG15g04680.1 Cpe15g00463 481921

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cpe15g00463 321 PANTHER TRIACYLGLYCEROL LIPASE 1 26 142 - -
Cpe15g00463 321 PANTHER TRIACYLGLYCEROL LIPASE 1 146 315 - -
Cpe15g00463 321 Gene3D alpha/beta hydrolase 145 314 IPR029058 -
Cpe15g00463 321 PANTHER LYSOSOMAL ACID LIPASE-RELATED 26 142 - -
Cpe15g00463 321 PANTHER LYSOSOMAL ACID LIPASE-RELATED 146 315 - -
Cpe15g00463 321 Gene3D alpha/beta hydrolase 70 144 IPR029058 -
Cpe15g00463 321 Pfam Partial alpha/beta-hydrolase lipase region 45 104 IPR006693 GO:0006629
Cpe15g00463 321 SUPERFAMILY alpha/beta-Hydrolases 44 313 IPR029058 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe15g00463 K01052 LIPA; lysosomal acid lipase/cholesteryl ester hydrolase [EC:3.1.1.13] - csv:101220653 343.199
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00618 Cpe-Chr3:3700076 Cpe15g00463 Cpe-Chr15:5674271 6.36E-19 dispersed
Cpe05g01534 Cpe-Chr5:10555329 Cpe15g00463 Cpe-Chr15:5674271 7.15E-27 dispersed
Cpe15g00463 Cpe-Chr15:5674271 Cpe20g00109 Cpe-Chr20:602439 1.34E-09 dispersed
Cpe15g00463 Cpe-Chr15:5674271 Cpe04g00496 Cpe-Chr4:5552407 2.85E-23 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g637 . . . . . . . . Cmo19g00591 . . . . . . . Cpe15g00463 . . . . . . . Cla02g00643 Cam02g0676 Cec02g0689 Cco02g0708 Clacu02g0684 Cmu02g0679 Cre02g0998 Cone12ag1066 Cone8ag1102 . . Lsi03g00540 . . . . . . Bda14g01460 . . Bma03g01369 . . . . . Cma19g00577 . Car19g00436 . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010290 1 2 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 2 1 1 1 32
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cpe15g00463 Cpe_Chr15 FPKM 0.0 0.0 0.0 0.0 0.0 0.342809 0.0 0.0 0.200975 0.144345